Human Gene IDI1 (ENST00000381344.8) from GENCODE V44
Description: Homo sapiens isopentenyl-diphosphate delta isomerase 1 (IDI1), transcript variant 1, mRNA. (from RefSeq NM_004508) RefSeq Summary (NM_004508): IDI1 encodes a peroxisomally-localized enzyme that catalyzes the interconversion of isopentenyl diphosphate (IPP) to its highly electrophilic isomer, dimethylallyl diphosphate (DMAPP), which are the substrates for the successive reaction that results in the synthesis of farnesyl diphosphate and, ultimately, cholesterol. It has been shown in peroxisomal deficiency diseases such as Zellweger syndrome and neonatal adrenoleukodystrophy that there is reduction in IPP isomerase activity. [provided by RefSeq, Jul 2008]. Gencode Transcript: ENST00000381344.8 Gencode Gene: ENSG00000067064.13 Transcript (Including UTRs) Position: hg38 chr10:1,039,419-1,049,119 Size: 9,701 Total Exon Count: 5 Strand: - Coding Region Position: hg38 chr10:1,041,187-1,049,003 Size: 7,817 Coding Exon Count: 5
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q13907
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Biological Process: GO:0006629 lipid metabolic process GO:0006694 steroid biosynthetic process GO:0006695 cholesterol biosynthetic process GO:0008202 steroid metabolic process GO:0008203 cholesterol metabolic process GO:0008299 isoprenoid biosynthetic process GO:0009240 isopentenyl diphosphate biosynthetic process GO:0016126 sterol biosynthetic process GO:0045540 regulation of cholesterol biosynthetic process GO:0050992 dimethylallyl diphosphate biosynthetic process
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