Human Gene PSD (ENST00000020673.6) from GENCODE V44
Description: Homo sapiens pleckstrin and Sec7 domain containing (PSD), transcript variant 1, mRNA. (from RefSeq NM_002779) RefSeq Summary (NM_002779): This gene encodes a Plekstrin homology and SEC7 domains-containing protein that functions as a guanine nucleotide exchange factor. The encoded protein regulates signal transduction by activating ADP-ribosylation factor 6. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2012]. Gencode Transcript: ENST00000020673.6 Gencode Gene: ENSG00000059915.17 Transcript (Including UTRs) Position: hg38 chr10:102,402,619-102,418,785 Size: 16,167 Total Exon Count: 17 Strand: - Coding Region Position: hg38 chr10:102,403,200-102,417,038 Size: 13,839 Coding Exon Count: 16
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on A5PKW4
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.