Human Gene ADCY9 (ENST00000294016.8) from GENCODE V44
  Description: Homo sapiens adenylate cyclase 9 (ADCY9), mRNA. (from RefSeq NM_001116)
RefSeq Summary (NM_001116): Adenylate cyclase is a membrane bound enzyme that catalyses the formation of cyclic AMP from ATP. It is regulated by a family of G protein-coupled receptors, protein kinases, and calcium. The type 9 adenylyl cyclase is a widely distributed adenylyl cyclase, and it is stimulated by beta-adrenergic receptor activation but is insensitive to forskolin, calcium, and somatostatin. [provided by RefSeq, Jul 2008]. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
Gencode Transcript: ENST00000294016.8
Gencode Gene: ENSG00000162104.10
Transcript (Including UTRs)
   Position: hg38 chr16:3,962,653-4,116,442 Size: 153,790 Total Exon Count: 11 Strand: -
Coding Region
   Position: hg38 chr16:3,965,775-4,115,442 Size: 149,668 Coding Exon Count: 10 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:3,962,653-4,116,442)mRNA (may differ from genome)Protein (1353 aa)
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HGNCHPRDLynxMalacardsMGIneXtProt
OMIMPubMedReactomeUniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: ADCY9_HUMAN
DESCRIPTION: RecName: Full=Adenylate cyclase type 9; EC=4.6.1.1; AltName: Full=ATP pyrophosphate-lyase 9; AltName: Full=Adenylate cyclase type IX; AltName: Full=Adenylyl cyclase 9;
FUNCTION: May play a fundamental role in situations where fine interplay between intracellular calcium and cAMP determines the cellular function. May be a physiologically relevant docking site for calcineurin (By similarity).
CATALYTIC ACTIVITY: ATP = 3',5'-cyclic AMP + diphosphate.
COFACTOR: Binds 2 magnesium ions per subunit.
ENZYME REGULATION: Insensitive to calcium/calmodulin, forskolin and somatostatin. Stimulated by beta-adrenergic receptor activation.
SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein.
TISSUE SPECIFICITY: Expressed in multiple cells of the lung, with expression highest in airway smooth muscle.
SIMILARITY: Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
SIMILARITY: Contains 2 guanylate cyclase domains.
SEQUENCE CAUTION: Sequence=AAC24201.1; Type=Frameshift; Positions=1252; Sequence=BAA25446.3; Type=Erroneous initiation; Note=Translation N-terminally shortened;

-  Primer design for this transcript
 

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-  MalaCards Disease Associations
  MalaCards Gene Search: ADCY9
Diseases sorted by gene-association score: chromosome 16p13.3 deletion syndrome, proximal (5), malaria (2)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 14.65 RPKM in Muscle - Skeletal
Total median expression: 288.18 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -490.80796-0.617 Picture PostScript Text
3' UTR -1091.013122-0.349 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR001054 - A/G_cyclase
IPR018297 - A/G_cyclase_CS

Pfam Domains:
PF00211 - Adenylate and Guanylate cyclase catalytic domain

ModBase Predicted Comparative 3D Structure on O60503
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserGenome BrowserGenome BrowserGenome BrowserNo ortholog
Gene Details     
Gene Sorter     
MGIRGDEnsemblEnsemblWormBase 
Protein SequenceProtein SequenceProtein SequenceProtein SequenceProtein Sequence 
AlignmentAlignmentAlignmentAlignmentAlignment 

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0004016 adenylate cyclase activity
GO:0004383 guanylate cyclase activity
GO:0005524 ATP binding
GO:0016829 lyase activity
GO:0016849 phosphorus-oxygen lyase activity
GO:0046872 metal ion binding

Biological Process:
GO:0003091 renal water homeostasis
GO:0006171 cAMP biosynthetic process
GO:0006182 cGMP biosynthetic process
GO:0007165 signal transduction
GO:0007186 G-protein coupled receptor signaling pathway
GO:0007189 adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007193 adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
GO:0009190 cyclic nucleotide biosynthetic process
GO:0035556 intracellular signal transduction
GO:0071377 cellular response to glucagon stimulus
GO:0071880 adenylate cyclase-activating adrenergic receptor signaling pathway

Cellular Component:
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0008074 guanylate cyclase complex, soluble
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030424 axon
GO:0030425 dendrite


-  Descriptions from all associated GenBank mRNAs
  BC151229 - Homo sapiens adenylate cyclase 9, mRNA (cDNA clone MGC:166903 IMAGE:9007273), complete cds.
AB011092 - Homo sapiens KIAA0520 mRNA for KIAA0520 protein.
BC136657 - Homo sapiens adenylate cyclase 9, mRNA (cDNA clone MGC:168270 IMAGE:9020647), complete cds.
BC136658 - Homo sapiens adenylate cyclase 9, mRNA (cDNA clone MGC:168271 IMAGE:9020648), complete cds.
AF036927 - Homo sapiens adenylyl cyclase type IX mRNA, complete cds.
AJ133123 - Homo sapiens mRNA for adenylyl cyclase type IX.
BC151207 - Homo sapiens adenylate cyclase 9, mRNA (cDNA clone MGC:164747 IMAGE:40147127), complete cds.
DQ005545 - Homo sapiens adenylyl cyclase type 9 (ADCY9) mRNA, complete cds.
DQ008441 - Homo sapiens adenylyl cyclase type 9 mRNA, complete cds.
KJ896379 - Synthetic construct Homo sapiens clone ccsbBroadEn_05773 ADCY9 gene, encodes complete protein.
KR711973 - Synthetic construct Homo sapiens clone CCSBHm_00033288 ADCY9 (ADCY9) mRNA, encodes complete protein.
AB384489 - Synthetic construct DNA, clone: pF1KA0520, Homo sapiens ADCY9 gene for adenylate cyclase type 9, complete cds, without stop codon, in Flexi system.
BC068612 - Homo sapiens cDNA clone IMAGE:30331160.
JD443480 - Sequence 424504 from Patent EP1572962.
JD047846 - Sequence 28870 from Patent EP1572962.
JD378318 - Sequence 359342 from Patent EP1572962.
JD363797 - Sequence 344821 from Patent EP1572962.
JD067478 - Sequence 48502 from Patent EP1572962.
JD236977 - Sequence 218001 from Patent EP1572962.
JD089764 - Sequence 70788 from Patent EP1572962.
JD172965 - Sequence 153989 from Patent EP1572962.
JD143158 - Sequence 124182 from Patent EP1572962.
JB025513 - Sequence 61 from Patent EP2505645.
JD162989 - Sequence 144013 from Patent EP1572962.
JD409745 - Sequence 390769 from Patent EP1572962.
JD120096 - Sequence 101120 from Patent EP1572962.
JD493111 - Sequence 474135 from Patent EP1572962.
JD438577 - Sequence 419601 from Patent EP1572962.
JD096021 - Sequence 77045 from Patent EP1572962.
AK022108 - Homo sapiens cDNA FLJ12046 fis, clone HEMBB1001962.
DQ584147 - Homo sapiens piRNA piR-51259, complete sequence.

-  Biochemical and Signaling Pathways
  KEGG - Kyoto Encyclopedia of Genes and Genomes
hsa00230 - Purine metabolism
hsa04020 - Calcium signaling pathway
hsa04062 - Chemokine signaling pathway
hsa04114 - Oocyte meiosis
hsa04270 - Vascular smooth muscle contraction
hsa04540 - Gap junction
hsa04912 - GnRH signaling pathway
hsa04914 - Progesterone-mediated oocyte maturation
hsa04916 - Melanogenesis
hsa04962 - Vasopressin-regulated water reabsorption
hsa05110 - Vibrio cholerae infection
hsa05414 - Dilated cardiomyopathy

Reactome (by CSHL, EBI, and GO)

Protein O60503 (Reactome details) participates in the following event(s):

R-HSA-163617 G alpha (s) activates adenylate cyclase
R-HSA-170672 Galpha-olf:GTP binds to adenylate cyclase and activates it
R-HSA-392064 G alpha (z) inhibits adenylate cyclase
R-HSA-392206 G alpha (i) inhibits adenylate cyclase
R-HSA-170674 Dissociation of the Gi alpha:G olf complex
R-HSA-170677 The G alpha-olf:GDP:Adenylate cyclase complex dissociates
R-HSA-170685 Adenylaye cyclase increases the GTPase activity of G alpha-olf
R-HSA-170686 Adenylate cyclase increases the GTPase activity of Gi alpha
R-HSA-170671 G alpha-olf:GTP binds to Gi alpha1:GTP:adenylate cyclase complex
R-HSA-111930 Adenylate cyclase produces cAMP
R-HSA-392129 Adenylate cyclase converts ATP to 3',5'-cyclic AMP (cAMP) and pyrophosphate
R-HSA-5610727 GPR161 promotes cAMP production in a G alpha(s)-dependent manner
R-HSA-164377 Activated Adenylate cyclase catalyses cAMP synthesis
R-HSA-170676 Adenylate cyclase converts ATP into cyclic AMP
R-HSA-170666 Adenylate cyclase increases the GTPase activity of G alpha-olf
R-HSA-163359 Glucagon signaling in metabolic regulation
R-HSA-418555 G alpha (s) signalling events
R-HSA-432040 Vasopressin regulates renal water homeostasis via Aquaporins
R-HSA-170660 Adenylate cyclase activating pathway
R-HSA-418597 G alpha (z) signalling events
R-HSA-170670 Adenylate cyclase inhibitory pathway
R-HSA-418594 G alpha (i) signalling events
R-HSA-163685 Energy Metabolism
R-HSA-388396 GPCR downstream signalling
R-HSA-445717 Aquaporin-mediated transport
R-HSA-112040 G-protein mediated events
R-HSA-997269 Inhibition of adenylate cyclase pathway
R-HSA-163615 PKA activation
R-HSA-5610787 Hedgehog 'off' state
R-HSA-164378 PKA activation in glucagon signalling
R-HSA-1430728 Metabolism
R-HSA-372790 Signaling by GPCR
R-HSA-382551 Transport of small molecules
R-HSA-111885 Opioid Signalling
R-HSA-991365 Activation of GABAB receptors
R-HSA-111931 PKA-mediated phosphorylation of CREB
R-HSA-5358351 Signaling by Hedgehog
R-HSA-162582 Signal Transduction
R-HSA-977444 GABA B receptor activation
R-HSA-111933 Calmodulin induced events
R-HSA-977443 GABA receptor activation
R-HSA-111997 CaM pathway
R-HSA-112314 Neurotransmitter receptors and postsynaptic signal transmission
R-HSA-111996 Ca-dependent events
R-HSA-1489509 DAG and IP3 signaling
R-HSA-112315 Transmission across Chemical Synapses
R-HSA-112043 PLC beta mediated events
R-HSA-9006925 Intracellular signaling by second messengers
R-HSA-112316 Neuronal System

-  Other Names for This Gene
  Alternate Gene Symbols: A7E2V5, ADCY9_HUMAN, D3DUD1, ENST00000294016.1, ENST00000294016.2, ENST00000294016.3, ENST00000294016.4, ENST00000294016.5, ENST00000294016.6, ENST00000294016.7, KIAA0520, NM_001116, O60273, O60503, Q4ZHT9, Q4ZIR5, Q9BWT4, Q9UGP2, uc002cvx.1, uc002cvx.2, uc002cvx.3, uc002cvx.4, uc002cvx.5
UCSC ID: ENST00000294016.8
RefSeq Accession: NM_001116
Protein: O60503 (aka ADCY9_HUMAN or CYA9_HUMAN)
CCDS: CCDS32382.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.