Human Gene ATP2B2 (ENST00000360273.7) from GENCODE V44
Description: Homo sapiens ATPase plasma membrane Ca2+ transporting 2 (ATP2B2), transcript variant 1, mRNA. (from RefSeq NM_001001331) RefSeq Summary (NM_001001331): The protein encoded by this gene belongs to the family of P-type primary ion transport ATPases characterized by the formation of an aspartyl phosphate intermediate during the reaction cycle. These enzymes remove bivalent calcium ions from eukaryotic cells against very large concentration gradients and play a critical role in intracellular calcium homeostasis. The mammalian plasma membrane calcium ATPase isoforms are encoded by at least four separate genes and the diversity of these enzymes is further increased by alternative splicing of transcripts. The expression of different isoforms and splice variants is regulated in a developmental, tissue- and cell type-specific manner, suggesting that these pumps are functionally adapted to the physiological needs of particular cells and tissues. This gene encodes the plasma membrane calcium ATPase isoform 2. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]. Gencode Transcript: ENST00000360273.7 Gencode Gene: ENSG00000157087.20 Transcript (Including UTRs) Position: hg38 chr3:10,324,023-10,505,586 Size: 181,564 Total Exon Count: 23 Strand: - Coding Region Position: hg38 chr3:10,328,814-10,449,543 Size: 120,730 Coding Exon Count: 22
ID:AT2B2_HUMAN DESCRIPTION: RecName: Full=Plasma membrane calcium-transporting ATPase 2; Short=PMCA2; EC=3.6.3.8; AltName: Full=Plasma membrane calcium ATPase isoform 2; AltName: Full=Plasma membrane calcium pump isoform 2; FUNCTION: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. CATALYTIC ACTIVITY: ATP + H(2)O + Ca(2+)(Side 1) = ADP + phosphate + Ca(2+)(Side 2). INTERACTION: Q63622:Dlg2 (xeno); NbExp=2; IntAct=EBI-1174262, EBI-396947; Q8SQG9:SLC9A3R2 (xeno); NbExp=3; IntAct=EBI-1174262, EBI-1174758; SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein. TISSUE SPECIFICITY: Mainly expressed in brain cortex. Found in low levels in skeletal muscle, heart muscle, stomach, liver, kidney and lung. Isoforms containing segment B are found in brain cortex and at low levels in other tissues. Isoforms containing segments X and W are found at low levels in all tissues. Isoforms containing segment A and segment Z are found at low levels in skeletal muscle and heart muscle. SIMILARITY: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIB subfamily.
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q01814
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Biological Process: GO:0006811 ion transport GO:0006816 calcium ion transport GO:0007605 sensory perception of sound GO:0030182 neuron differentiation GO:0034220 ion transmembrane transport GO:0051480 regulation of cytosolic calcium ion concentration GO:0070588 calcium ion transmembrane transport GO:0099132 ATP hydrolysis coupled cation transmembrane transport GO:1903779 regulation of cardiac conduction
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