Human Gene ZSWIM6 (ENST00000252744.6) from GENCODE V44
Description: Homo sapiens zinc finger SWIM-type containing 6 (ZSWIM6), mRNA. (from RefSeq NM_020928) RefSeq Summary (NM_020928): The protein encoded by this gene contains a zinc finger SWI2/SNF2 and MuDR (SWIM) domain. Proteins with SWIM domains have been found in a diverse number of species and are predicted to interact with DNA or proteins. Mutations in this gene result in acromelic frontonasal dysostosis. [provided by RefSeq, Apr 2017]. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript was available for the full length of the gene. The extent of this transcript is supported by orthologous and paralogous data. Gencode Transcript: ENST00000252744.6 Gencode Gene: ENSG00000130449.6 Transcript (Including UTRs) Position: hg38 chr5:61,332,258-61,546,172 Size: 213,915 Total Exon Count: 14 Strand: + Coding Region Position: hg38 chr5:61,332,273-61,544,317 Size: 212,045 Coding Exon Count: 14
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q9HCJ5
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
US Server
