Human Gene OR10K1 (ENST00000641432.1) from GENCODE V44
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Sequence and Links to Tools and Databases
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Comments and Description Text from UniProtKB
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ID: O10K1_HUMAN
DESCRIPTION: RecName: Full=Olfactory receptor 10K1; AltName: Full=Olfactory receptor OR1-6;
FUNCTION: Odorant receptor (Potential). SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein. SIMILARITY: Belongs to the G-protein coupled receptor 1 family. WEB RESOURCE: Name=Human Olfactory Receptor Data Exploratorium (HORDE); URL="http://bip.weizmann.ac.il/cgi-bin/HORDE/showGene.pl?key=symbol&value=OR10K1";
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Primer design for this transcript
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Press "+" in the title bar above to open this section.
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mRNA Secondary Structure of 3' and 5' UTRs
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The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
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Protein Domain and Structure Information
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InterPro Domains: Graphical view of domain structure IPR000276 - 7TM_GPCR_Rhodpsn
IPR017452 - GPCR_Rhodpsn_supfam
IPR000725 - Olfact_rcpt
ModBase Predicted Comparative 3D Structure on Q8NGX5
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
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Gene Ontology (GO) Annotations with Structured Vocabulary
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Descriptions from all associated GenBank mRNAs
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BC137323 - Homo sapiens olfactory receptor, family 10, subfamily K, member 1, mRNA (cDNA clone MGC:168943 IMAGE:9021320), complete cds. BC137324 - Homo sapiens olfactory receptor, family 10, subfamily K, member 1, mRNA (cDNA clone MGC:168944 IMAGE:9021321), complete cds. AB529282 - Synthetic construct DNA, clone: pF1KE0862, Homo sapiens OR10K1 gene for olfactory receptor, family 10, subfamily K, member 1, without stop codon, in Flexi system. KJ896224 - Synthetic construct Homo sapiens clone ccsbBroadEn_05618 OR10K1 gene, encodes complete protein. JD438642 - Sequence 419666 from Patent EP1572962.
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Biochemical and Signaling Pathways
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Other Names for This Gene
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Alternate Gene Symbols: O10K1_HUMAN, Q6IFS2, Q8NGX5, uc010pij.1, uc010pij.2, uc010pij.3 UCSC ID: ENST00000641432.1 Protein: Q8NGX5
(aka O10K1_HUMAN or OAK1_HUMAN)
CCDS: CCDS30897.1
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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