Human Gene ENSG00000275993 (ENST00000613488.3) from GENCODE V44
  Description: ENSG00000275993 (from geneSymbol)
Gencode Transcript: ENST00000613488.3
Gencode Gene: ENSG00000275993.4
Transcript (Including UTRs)
   Position: hg38 chr21:6,111,131-6,123,778 Size: 12,648 Total Exon Count: 14 Strand: +


Page IndexSequence and LinksPrimersMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr21:6,111,131-6,123,778)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
ExonPrimerGencodeLynxPubMed

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC038504 - Homo sapiens salt-inducible kinase 1, mRNA (cDNA clone MGC:33415 IMAGE:4831049), complete cds.
AB047786 - Homo sapiens SNF1LK mRNA for serine/threonine protein kinase, complete cds.
JD186847 - Sequence 167871 from Patent EP1572962.
DQ892466 - Synthetic construct clone IMAGE:100005096; FLH186581.01X; RZPDo839G0171D SNF1-like kinase (SNF1LK) gene, encodes complete protein.
DQ895679 - Synthetic construct Homo sapiens clone IMAGE:100010139; FLH186577.01L; RZPDo839G0161D SNF1-like kinase (SNF1LK) gene, encodes complete protein.
CU691580 - Synthetic construct Homo sapiens gateway clone IMAGE:100020082 5' read SNF1LK mRNA.
KJ900271 - Synthetic construct Homo sapiens clone ccsbBroadEn_09665 SIK1 gene, encodes complete protein.
KJ905625 - Synthetic construct Homo sapiens clone ccsbBroadEn_15264 SIK1 gene, encodes complete protein.
AK131076 - Homo sapiens mRNA for FLJ00263 protein.
JD241750 - Sequence 222774 from Patent EP1572962.
JD566147 - Sequence 547171 from Patent EP1572962.
JD067351 - Sequence 48375 from Patent EP1572962.
JD077137 - Sequence 58161 from Patent EP1572962.
JD214331 - Sequence 195355 from Patent EP1572962.
JD184405 - Sequence 165429 from Patent EP1572962.
JD311108 - Sequence 292132 from Patent EP1572962.
JD258231 - Sequence 239255 from Patent EP1572962.
JD358392 - Sequence 339416 from Patent EP1572962.
JD109934 - Sequence 90958 from Patent EP1572962.
JD186467 - Sequence 167491 from Patent EP1572962.
JD511066 - Sequence 492090 from Patent EP1572962.
JD560237 - Sequence 541261 from Patent EP1572962.
JD060956 - Sequence 41980 from Patent EP1572962.
JD225648 - Sequence 206672 from Patent EP1572962.
JD076961 - Sequence 57985 from Patent EP1572962.
JD483287 - Sequence 464311 from Patent EP1572962.
JD469219 - Sequence 450243 from Patent EP1572962.
JD170659 - Sequence 151683 from Patent EP1572962.
JD507110 - Sequence 488134 from Patent EP1572962.
JD344881 - Sequence 325905 from Patent EP1572962.
JD523566 - Sequence 504590 from Patent EP1572962.
JD451145 - Sequence 432169 from Patent EP1572962.
JD389148 - Sequence 370172 from Patent EP1572962.
JD126760 - Sequence 107784 from Patent EP1572962.
JD248552 - Sequence 229576 from Patent EP1572962.
JD370144 - Sequence 351168 from Patent EP1572962.
JD368070 - Sequence 349094 from Patent EP1572962.
JD425749 - Sequence 406773 from Patent EP1572962.
JD044677 - Sequence 25701 from Patent EP1572962.
JD226477 - Sequence 207501 from Patent EP1572962.
JD389820 - Sequence 370844 from Patent EP1572962.
JD431260 - Sequence 412284 from Patent EP1572962.
JD180008 - Sequence 161032 from Patent EP1572962.
JD128482 - Sequence 109506 from Patent EP1572962.
JD437182 - Sequence 418206 from Patent EP1572962.
JD159866 - Sequence 140890 from Patent EP1572962.
JD543736 - Sequence 524760 from Patent EP1572962.
JD384633 - Sequence 365657 from Patent EP1572962.
JD118936 - Sequence 99960 from Patent EP1572962.
JD102284 - Sequence 83308 from Patent EP1572962.
JD058925 - Sequence 39949 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: AB047786, ENST00000613488.1, ENST00000613488.2, uc032pqz.1, uc032pqz.2, uc032pqz.3
UCSC ID: ENST00000613488.3
RefSeq Accession: NM_001320643
CCDS: CCDS82645.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.