Human Gene AVPR2 (ENST00000646375.2) from GENCODE V39
  Description: Homo sapiens arginine vasopressin receptor 2 (AVPR2), transcript variant 1, mRNA. (from RefSeq NM_000054)
RefSeq Summary (NM_000054): This gene encodes the vasopressin receptor, type 2, also known as the V2 receptor, which belongs to the seven-transmembrane-domain G protein-coupled receptor (GPCR) superfamily, and couples to Gs thus stimulating adenylate cyclase. The subfamily that includes the V2 receptor, the V1a and V1b vasopressin receptors, the oxytocin receptor, and isotocin and mesotocin receptors in non-mammals, is well conserved, though several members signal via other G proteins. All bind similar cyclic nonapeptide hormones. The V2 receptor is expressed in the kidney tubule, predominantly in the distal convoluted tubule and collecting ducts, where its primary property is to respond to the pituitary hormone arginine vasopressin (AVP) by stimulating mechanisms that concentrate the urine and maintain water homeostasis in the organism. When the function of this gene is lost, the disease Nephrogenic Diabetes Insipidus (NDI) results. The V2 receptor is also expressed outside the kidney although its tissue localization is uncertain. When these 'extrarenal receptors' are stimulated by infusion of a V2 selective agonist (dDAVP), a variety of clotting factors are released into the bloodstream. The physiologic importance of this property is not known - its absence does not appear to be detrimental in NDI patients. The gene expression has also been described in fetal lung tissue and lung cancer associated with alternative splicing. [provided by RefSeq, Jul 2008]. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Gencode Transcript: ENST00000646375.2
Gencode Gene: ENSG00000126895.16
Transcript (Including UTRs)
   Position: hg38 chrX:153,904,673-153,907,166 Size: 2,494 Total Exon Count: 4 Strand: +
Coding Region
   Position: hg38 chrX:153,905,146-153,906,728 Size: 1,583 Coding Exon Count: 3 

Page IndexSequence and LinksUniProtKB CommentsMalaCardsCTDRNA-Seq Expression
Microarray ExpressionRNA StructureProtein StructureOther SpeciesGO AnnotationsmRNA Descriptions
PathwaysOther NamesGeneReviewsMethods
Data last updated at UCSC: 2022-01-17 08:30:34

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chrX:153,904,673-153,907,166)mRNA (may differ from genome)Protein (371 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerGencodeGeneCards
HGNCHPRDMGIOMIMPubMedReactome
UniProtKBWikipedia

-  Comments and Description Text from UniProtKB
  ID: V2R_HUMAN
DESCRIPTION: RecName: Full=Vasopressin V2 receptor; Short=V2R; AltName: Full=AVPR V2; AltName: Full=Antidiuretic hormone receptor; AltName: Full=Renal-type arginine vasopressin receptor;
FUNCTION: Receptor for arginine vasopressin. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Involved in renal water reabsorption.
SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein.
TISSUE SPECIFICITY: Kidney.
DISEASE: Defects in AVPR2 are the cause of nephrogenic syndrome of inappropriate antidiuresis (NSIAD) [MIM:300539]. This disorder is characterized by an inability to excrete a free water load, with inappropriately concentrated urine and resultant hyponatremia, hypoosmolarity, and natriuresis.
DISEASE: Defects in AVPR2 are the cause of diabetes insipidus nephrogenic X-linked (XNDI) [MIM:304800]; also known as diabetes insipidus nephrogenic type 1. XNDI is caused by the inability of the renal collecting ducts to absorb water in response to arginine vasopressin. It is characterized by excessive water drinking (polydypsia), excessive urine excretion (polyuria), persistent hypotonic urine, and hypokalemia.
SIMILARITY: Belongs to the G-protein coupled receptor 1 family. Vasopressin/oxytocin receptor subfamily.
WEB RESOURCE: Name=Nephrogenic and neurogenic Diabetes Insipidus; Note=AVPR2 pages; URL="http://www.medicine.mcgill.ca/nephros/avpr2.html";
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/AVPR2";

-  MalaCards Disease Associations
  MalaCards Gene Search: AVPR2
Diseases sorted by gene-association score: diabetes insipidus, nephrogenic* (1815), nephrogenic syndrome of inappropriate antidiuresis* (1691), diabetes insipidus (60), neonatal candidiasis (15), salpingitis isthmica nodosa (15), diabetes insipidus, neurohypophyseal (15), impaired renal function disease (14), polyradiculopathy (12), laryngostenosis (11), endolymphatic sac tumor (10), inappropriate adh syndrome (10), syndrome of inappropriate antidiuretic hormone (10), polycystic kidney disease 4, with or without hepatic disease (9), dracunculiasis (9), tuberculous empyema (9), spinal canal intradural extramedullary neoplasm (8), acth-independent macronodular adrenal hyperplasia (8), bronchus cancer (6), spinal cord disease (6), chronic salpingitis (5), congenital epulis (5), encephalomalacia (5), tetanus neonatorum (4), ectopic cushing syndrome (4), autosomal dominant polycystic kidney disease (3)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 5.03 RPKM in Adipose - Subcutaneous
Total median expression: 51.27 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -103.40271-0.382 Picture PostScript Text
3' UTR -205.50438-0.469 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000276 - 7TM_GPCR_Rhodpsn
IPR017452 - GPCR_Rhodpsn_supfam
IPR001817 - Vasoprsn_rcpt
IPR000161 - Vprsn_rcpt_V2

Pfam Domains:
PF00001 - 7 transmembrane receptor (rhodopsin family)

ModBase Predicted Comparative 3D Structure on P30518
FrontTopSide
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004871 signal transducer activity
GO:0004930 G-protein coupled receptor activity
GO:0005000 vasopressin receptor activity
GO:0005515 protein binding
GO:0042277 peptide binding

Biological Process:
GO:0001992 regulation of systemic arterial blood pressure by vasopressin
GO:0003091 renal water homeostasis
GO:0007165 signal transduction
GO:0007186 G-protein coupled receptor signaling pathway
GO:0007188 adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007190 activation of adenylate cyclase activity
GO:0007588 excretion
GO:0007599 hemostasis
GO:0010628 positive regulation of gene expression
GO:0031398 positive regulation of protein ubiquitination
GO:0032870 cellular response to hormone stimulus
GO:0045907 positive regulation of vasoconstriction
GO:0061024 membrane organization
GO:1901652 response to peptide

Cellular Component:
GO:0005768 endosome
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030665 clathrin-coated vesicle membrane


-  Descriptions from all associated GenBank mRNAs
  BC015746 - Homo sapiens arginine vasopressin receptor 2, mRNA (cDNA clone IMAGE:4908956).
BC033090 - Homo sapiens arginine vasopressin receptor 2, mRNA (cDNA clone IMAGE:5019572).
BC041642 - Homo sapiens, Similar to arginine vasopressin receptor 2 (nephrogenic diabetes insipidus), clone IMAGE:5019146, mRNA.
BC080603 - Homo sapiens arginine vasopressin receptor 2 (nephrogenic diabetes insipidus), mRNA (cDNA clone IMAGE:5018991).
JD059962 - Sequence 40986 from Patent EP1572962.
JD116089 - Sequence 97113 from Patent EP1572962.
JD051425 - Sequence 32449 from Patent EP1572962.
JD534229 - Sequence 515253 from Patent EP1572962.
JD534230 - Sequence 515254 from Patent EP1572962.
JD405020 - Sequence 386044 from Patent EP1572962.
JD376955 - Sequence 357979 from Patent EP1572962.
Z11687 - H.sapiens mRNA for antidiuretic hormone receptor.
JD131820 - Sequence 112844 from Patent EP1572962.
AF030626 - Homo sapiens vasopressin V2 receptor mRNA, complete cds.
AF032388 - Homo sapiens vasopressin receptor type 2 mRNA, alternatively spliced, complete cds.
AF101727 - Homo sapiens vasopressin receptor type 2 mRNA, complete cds.
AF101728 - Homo sapiens truncated vasopressin receptor type 2 mRNA, complete cds.
BC101484 - Homo sapiens arginine vasopressin receptor 2, mRNA (cDNA clone MGC:126533 IMAGE:8068990), complete cds.
BC112181 - Homo sapiens arginine vasopressin receptor 2, mRNA (cDNA clone MGC:138386 IMAGE:8327649), complete cds.
JD039703 - Sequence 20727 from Patent EP1572962.
KJ896481 - Synthetic construct Homo sapiens clone ccsbBroadEn_05875 AVPR2 gene, encodes complete protein.
KR712153 - Synthetic construct Homo sapiens clone CCSBHm_00036168 AVPR2 (AVPR2) mRNA, encodes complete protein.
KR712154 - Synthetic construct Homo sapiens clone CCSBHm_00036249 AVPR2 (AVPR2) mRNA, encodes complete protein.
AB527584 - Synthetic construct DNA, clone: pF1KB6553, Homo sapiens AVPR2 gene for arginine vasopressin receptor 2, without stop codon, in Flexi system.
AY242131 - Homo sapiens arginine vasopressin receptor 2 (AVPR2) mRNA, complete cds.
JD440536 - Sequence 421560 from Patent EP1572962.
JD309948 - Sequence 290972 from Patent EP1572962.
JD178575 - Sequence 159599 from Patent EP1572962.
JD123991 - Sequence 105015 from Patent EP1572962.
JD493719 - Sequence 474743 from Patent EP1572962.
JD298143 - Sequence 279167 from Patent EP1572962.
JD525545 - Sequence 506569 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein P30518 (Reactome details) participates in the following event(s):

R-HSA-392263 AVP(20-28) binds AVPR2
R-HSA-432188 AVP:AVPR2 Complex binds inactive heterotrimeric G(s) complex
R-HSA-8866268 ADBRK1,2 phosphorylate AVPR2
R-HSA-744886 The Ligand:GPCR:Gs complex dissociates
R-HSA-432195 AVP:AVPR2:heterotrimeric G(s) complex exchanges GDP for GTP
R-HSA-744887 Liganded Gs-activating GPCRs bind inactive heterotrimeric Gs
R-HSA-8866269 ARRB bind GPCRs
R-HSA-379044 Liganded Gs-activating GPCR acts as a GEF for Gs
R-HSA-8866283 ARBB recruits GPCRs into clathrin-coated pits
R-HSA-8867756 CLASP proteins and cargo are recruited to the nascent clathrin-coated pit
R-HSA-8868071 Clathrin recruits PIK3C2A
R-HSA-8868661 Dynamin-mediated GTP hydrolysis promotes vesicle scission
R-HSA-8868648 SYNJ hydrolyze PI(4,5)P2 to PI(4)P
R-HSA-8871194 RAB5 and GAPVD1 bind AP-2
R-HSA-8868658 HSPA8-mediated ATP hydrolysis promotes vesicle uncoating
R-HSA-8868659 Clathrin recruits auxilins to the clathrin-coated vesicle
R-HSA-8868660 Auxilin recruits HSPA8:ATP to the clathrin-coated vesicle
R-HSA-8867754 F- and N- BAR domain proteins bind the clathrin-coated pit
R-HSA-8868230 SNX9 recruits components of the actin polymerizing machinery
R-HSA-8868072 Clathrin-associated PIK3C2A phosphorylates PI(4)P to PI(3,4)P2
R-HSA-8868236 BAR domain proteins recruit dynamin
R-HSA-8868651 Endophilins recruit synaptojanins to the clathrin-coated pit
R-HSA-388479 Vasopressin-like receptors
R-HSA-432040 Vasopressin regulates renal water homeostasis via Aquaporins
R-HSA-9036092 Defective AVP causes neurohypophyseal diabetes insipidus (NDI)
R-HSA-8856825 Cargo recognition for clathrin-mediated endocytosis
R-HSA-418555 G alpha (s) signalling events
R-HSA-375276 Peptide ligand-binding receptors
R-HSA-445717 Aquaporin-mediated transport
R-HSA-5619102 SLC transporter disorders
R-HSA-8856828 Clathrin-mediated endocytosis
R-HSA-388396 GPCR downstream signalling
R-HSA-373076 Class A/1 (Rhodopsin-like receptors)
R-HSA-382551 Transport of small molecules
R-HSA-5619115 Disorders of transmembrane transporters
R-HSA-199991 Membrane Trafficking
R-HSA-372790 Signaling by GPCR
R-HSA-500792 GPCR ligand binding
R-HSA-1643685 Disease
R-HSA-5653656 Vesicle-mediated transport
R-HSA-162582 Signal Transduction

-  Other Names for This Gene
  Alternate Gene Symbols: ADHR, C5HF20, DIR, DIR3, ENST00000646375.1, NM_000054, O43192, P30518, Q3MJD3, Q9UCV9, uc004fjh.1, uc004fjh.2, uc004fjh.3, uc004fjh.4, uc004fjh.5, uc004fjh.6, uc004fjh.7, V2R, V2R_HUMAN
UCSC ID: ENST00000646375.2
RefSeq Accession: NM_000054
Protein: P30518 (aka V2R_HUMAN)

-  GeneReviews for This Gene
  GeneReviews article(s) related to gene AVPR2:
ndi (Hereditary Nephrogenic Diabetes Insipidus)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.