Mouse Gene Bche (ENSMUST00000029367.6) from GENCODE VM33
  Description: Mus musculus butyrylcholinesterase (Bche), mRNA. (from RefSeq NM_009738)
Gencode Transcript: ENSMUST00000029367.6
Gencode Gene: ENSMUSG00000027792.12
Transcript (Including UTRs)
   Position: mm39 chr3:73,543,141-73,615,748 Size: 72,608 Total Exon Count: 4 Strand: -
Coding Region
   Position: mm39 chr3:73,547,250-73,609,424 Size: 62,175 Coding Exon Count: 3 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDRNA Structure
Protein StructureOther SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther Names
Methods
Data last updated at UCSC: 2023-08-15 19:06:27

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr3:73,543,141-73,615,748)mRNA (may differ from genome)Protein (603 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGeneCardsMGI
PubMedReactomeSOURCEUniProtKB

-  Comments and Description Text from UniProtKB
  ID: CHLE_MOUSE
DESCRIPTION: RecName: Full=Cholinesterase; EC=3.1.1.8; AltName: Full=Acylcholine acylhydrolase; AltName: Full=Butyrylcholine esterase; AltName: Full=Choline esterase II; AltName: Full=Pseudocholinesterase; Flags: Precursor;
FUNCTION: Esterase with broad substrate specificity. Contributes to the inactivation of the neurotransmitter acetylcholine. Can degrade neurotoxic organophosphate esters.
CATALYTIC ACTIVITY: An acylcholine + H(2)O = choline + a carboxylate.
SUBUNIT: Homotetramer; disulfide-linked. Dimer of dimers (By similarity).
SUBCELLULAR LOCATION: Secreted (By similarity).
TISSUE SPECIFICITY: Present in most cells except erythrocytes.
DISRUPTION PHENOTYPE: No visible phenotype; due to the presence of other cholinesterases. Hypersensitive to acetylcholinesterase inhibitors, such as huperzine and donepezil. Treatment with the acetylcholinesterase inhibitor donepezil causes convulsions and death within 3 hours of dosing.
SIMILARITY: Belongs to the type-B carboxylesterase/lipase family.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -96.40289-0.334 Picture PostScript Text
3' UTR -964.604109-0.235 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR014788 - AChE_tetra
IPR002018 - CarbesteraseB
IPR019826 - Carboxylesterase_B_AS
IPR019819 - Carboxylesterase_B_CS
IPR000997 - Cholinesterase

Pfam Domains:
PF08674 - Acetylcholinesterase tetramerisation domain
PF00135 - Carboxylesterase family

ModBase Predicted Comparative 3D Structure on Q03311
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologGenome BrowserNo ortholog
Gene Details     
Gene Sorter     
GenBankRGD  WormBase 
Protein SequenceProtein Sequence  Protein Sequence 
AlignmentAlignment  Alignment 

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003990 acetylcholinesterase activity
GO:0004104 cholinesterase activity
GO:0016787 hydrolase activity
GO:0033265 choline binding
GO:0042802 identical protein binding
GO:0052689 carboxylic ester hydrolase activity

Biological Process:
GO:0007584 response to nutrient
GO:0007612 learning
GO:0008285 negative regulation of cell proliferation
GO:0014016 neuroblast differentiation
GO:0019695 choline metabolic process
GO:0042493 response to drug
GO:0043279 response to alkaloid
GO:0050805 negative regulation of synaptic transmission
GO:0051384 response to glucocorticoid
GO:0051593 response to folic acid

Cellular Component:
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005641 nuclear envelope lumen
GO:0005783 endoplasmic reticulum
GO:0005788 endoplasmic reticulum lumen
GO:0016020 membrane


-  Descriptions from all associated GenBank mRNAs
  BC099977 - Mus musculus butyrylcholinesterase, mRNA (cDNA clone MGC:107651 IMAGE:6751601), complete cds.
AK050337 - Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730038G20 product:butyrylcholinesterase, full insert sequence.
M99492 - Mouse butyrylcholinesterase mRNA, complete cds.
AK052200 - Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330006P10 product:butyrylcholinesterase, full insert sequence.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q03311 (Reactome details) participates in the following event(s):

R-MMU-372519 AcCho is hydrolyzed to Cho and acetate by ACHE
R-MMU-9023617 Butyrylcholinesterase hydrolyzes acyl Ghrelin
R-MMU-112311 Neurotransmitter clearance
R-MMU-1483191 Synthesis of PC
R-MMU-422085 Synthesis, secretion, and deacylation of Ghrelin
R-MMU-112315 Transmission across Chemical Synapses
R-MMU-1483206 Glycerophospholipid biosynthesis
R-MMU-2980736 Peptide hormone metabolism
R-MMU-112316 Neuronal System
R-MMU-1483257 Phospholipid metabolism
R-MMU-392499 Metabolism of proteins
R-MMU-556833 Metabolism of lipids
R-MMU-1430728 Metabolism

-  Other Names for This Gene
  Alternate Gene Symbols: CHLE_MOUSE, ENSMUST00000029367.1, ENSMUST00000029367.2, ENSMUST00000029367.3, ENSMUST00000029367.4, ENSMUST00000029367.5, NM_009738, Q03311, Q543J3, uc008pmw.1, uc008pmw.2, uc008pmw.3
UCSC ID: ENSMUST00000029367.6
RefSeq Accession: NM_009738
Protein: Q03311 (aka CHLE_MOUSE)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.