encRegTfbsClustered Track Settings

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

ENCODE TFBS Clustered

Display mode: Reset to defaults

Hide empty subtracks:

All subtracks:

List subtracks: only selected/visible all ()
	dense	AFF1_K562	AFF1_K562	Data format
	dense	AGO1_HepG2	AGO1_HepG2	Data format
	dense	AGO1_K562	AGO1_K562	Data format
	dense	AGO2_HepG2	AGO2_HepG2	Data format
	dense	ARHGAP35_K562	ARHGAP35_K562	Data format
	dense	ARID1B_K562	ARID1B_K562	Data format
	dense	ARID2_K562	ARID2_K562	Data format
	dense	ARID3A_HepG2	ARID3A_HepG2	Data format
	dense	ARID3A_K562	ARID3A_K562	Data format
	dense	ARID3A_MCF-7	ARID3A_MCF-7	Data format
	dense	ARNT_GM12878	ARNT_GM12878	Data format
	dense	ARNT_HEK293T	ARNT_HEK293T	Data format
	dense	ARNT_HepG2	ARNT_HepG2	Data format
	dense	ARNT_K562	ARNT_K562	Data format
	dense	ASH1L_K562	ASH1L_K562	Data format
	dense	ASH2L_H1-hESC	ASH2L_H1-hESC	Data format
	dense	ASH2L_HepG2	ASH2L_HepG2	Data format
	dense	ATF2_HepG2	ATF2_HepG2	Data format
	dense	ATF2_K562	ATF2_K562	Data format
	dense	ATF3_A549	ATF3_A549	Data format
	dense	ATF3_H1-hESC	ATF3_H1-hESC	Data format
	dense	ATF3_HepG2	ATF3_HepG2	Data format
	dense	ATF3_K562	ATF3_K562	Data format
	dense	ATF3_liver	ATF3_liver	Data format
	dense	ATF4_K562	ATF4_K562	Data format
	dense	ATF7_GM12878	ATF7_GM12878	Data format
	dense	ATF7_HepG2	ATF7_HepG2	Data format
	dense	ATF7_K562	ATF7_K562	Data format
	dense	ATF7_MCF-7	ATF7_MCF-7	Data format
	dense	ATM_HepG2	ATM_HepG2	Data format
	dense	BACH1_H1-hESC	BACH1_H1-hESC	Data format
	dense	BCL11A_H1-hESC	BCL11A_H1-hESC	Data format
	dense	BCL3_A549	BCL3_A549	Data format
	dense	BCOR_K562	BCOR_K562	Data format
	dense	BHLHE40_HEK293T	BHLHE40_HEK293T	Data format
	dense	BHLHE40_HepG2	BHLHE40_HepG2	Data format
	dense	BHLHE40_IMR-90	BHLHE40_IMR-90	Data format
	dense	BHLHE40_K562	BHLHE40_K562	Data format
	dense	BMI1_GM12878	BMI1_GM12878	Data format
	dense	BMI1_K562	BMI1_K562	Data format
	dense	BMI1_MCF-7	BMI1_MCF-7	Data format
	dense	BRCA1_H1-hESC	BRCA1_H1-hESC	Data format
	dense	BRCA1_HepG2	BRCA1_HepG2	Data format
	dense	BRCA1_K562	BRCA1_K562	Data format
	dense	BRD4_HepG2	BRD4_HepG2	Data format
	dense	BRD4_K562	BRD4_K562	Data format
	dense	BRD9_K562	BRD9_K562	Data format
	dense	C11orf30_K562	C11orf30_K562	Data format
	dense	CBFA2T2_K562	CBFA2T2_K562	Data format
	dense	CBFA2T3_K562	CBFA2T3_K562	Data format
	dense	CBX1_K562	CBX1_K562	Data format
	dense	CBX2_A549	CBX2_A549	Data format
	dense	CBX2_HepG2	CBX2_HepG2	Data format
	dense	CBX3_GM12878	CBX3_GM12878	Data format
	dense	CBX3_K562	CBX3_K562	Data format
	dense	CBX5_K562	CBX5_K562	Data format
	dense	CC2D1A_K562	CC2D1A_K562	Data format
	dense	CCAR2_HepG2	CCAR2_HepG2	Data format
	dense	CCAR2_K562	CCAR2_K562	Data format
	dense	CDC5L_K562	CDC5L_K562	Data format
	dense	CEBPB_A549	CEBPB_A549	Data format
	dense	CEBPB_GM12878	CEBPB_GM12878	Data format
	dense	CEBPB_HepG2	CEBPB_HepG2	Data format
	dense	CEBPB_IMR-90	CEBPB_IMR-90	Data format
	dense	CEBPB_K562	CEBPB_K562	Data format
	dense	CHAMP1_K562	CHAMP1_K562	Data format
	dense	CHD1_H1-hESC	CHD1_H1-hESC	Data format
	dense	CHD1_IMR-90	CHD1_IMR-90	Data format
	dense	CHD1_MCF-7	CHD1_MCF-7	Data format
	dense	CHD4_A549	CHD4_A549	Data format
	dense	CHD4_HepG2	CHD4_HepG2	Data format
	dense	CHD7_H1-hESC	CHD7_H1-hESC	Data format
	dense	CLOCK_MCF-7	CLOCK_MCF-7	Data format
	dense	COPS2_K562	COPS2_K562	Data format
	dense	COPS2_MCF-7	COPS2_MCF-7	Data format
	dense	CREB1_A549	CREB1_A549	Data format
	dense	CREB1_HepG2	CREB1_HepG2	Data format
	dense	CREB1_MCF-7	CREB1_MCF-7	Data format
	dense	CREB3L1_K562	CREB3L1_K562	Data format
	dense	CREBBP_K562	CREBBP_K562	Data format
	dense	CREM_HepG2	CREM_HepG2	Data format
	dense	CREM_K562	CREM_K562	Data format
	dense	CTBP1_HEK293T	CTBP1_HEK293T	Data format
	dense	CTBP1_K562	CTBP1_K562	Data format
	dense	CTBP1_MCF-7	CTBP1_MCF-7	Data format
	dense	CTCF_22Rv1	CTCF_22Rv1	Data format
	dense	CTCF_A549	CTCF_A549	Data format
	dense	CTCF_A673	CTCF_A673	Data format
	dense	CTCF_adrenal_gland	CTCF_adrenal_gland	Data format
	dense	CTCF_AG04449	CTCF_AG04449	Data format
	dense	CTCF_AG04450	CTCF_AG04450	Data format
	dense	CTCF_AG09309	CTCF_AG09309	Data format
	dense	CTCF_AG09319	CTCF_AG09319	Data format
	dense	CTCF_AG10803	CTCF_AG10803	Data format
	dense	CTCF_ascending_aorta	CTCF_ascending_aorta	Data format
	dense	CTCF_astrocyte	CTCF_astrocyte	Data format
	dense	CTCF_astrocyte_of_the_cerebellum	CTCF_astrocyte_of_the_cerebellum	Data format
	dense	CTCF_astrocyte_of_the_spinal_cord	CTCF_astrocyte_of_the_spinal_cord	Data format
	dense	CTCF_B_cell	CTCF_B_cell	Data format
	dense	CTCF_BE2C	CTCF_BE2C	Data format
	dense	CTCF_bipolar_neuron	CTCF_bipolar_neuron	Data format
	dense	CTCF_BJ	CTCF_BJ	Data format
	dense	CTCF_body_of_pancreas	CTCF_body_of_pancreas	Data format
	dense	CTCF_brain_microvascular_endothelial_cell	CTCF_brain_microvascular_endothelial_cell	Data format
	dense	CTCF_breast_epithelium	CTCF_breast_epithelium	Data format
	dense	CTCF_C4-2B	CTCF_C4-2B	Data format
	dense	CTCF_Caco-2	CTCF_Caco-2	Data format
	dense	CTCF_cardiac_fibroblast	CTCF_cardiac_fibroblast	Data format
	dense	CTCF_cardiac_muscle_cell	CTCF_cardiac_muscle_cell	Data format
	dense	CTCF_CD14-positive_monocyte	CTCF_CD14-positive_monocyte	Data format
	dense	CTCF_choroid_plexus_epithelial_cell	CTCF_choroid_plexus_epithelial_cell	Data format
	dense	CTCF_DOHH2	CTCF_DOHH2	Data format
	dense	CTCF_endothelial_cell_of_umbilical_vein	CTCF_endothelial_cell_of_umbilical_vein	Data format
	dense	CTCF_epithelial_cell_of_esophagus	CTCF_epithelial_cell_of_esophagus	Data format
	dense	CTCF_epithelial_cell_of_prostate	CTCF_epithelial_cell_of_prostate	Data format
	dense	CTCF_esophagus_muscularis_mucosa	CTCF_esophagus_muscularis_mucosa	Data format
	dense	CTCF_esophagus_squamous_epithelium	CTCF_esophagus_squamous_epithelium	Data format
	dense	CTCF_fibroblast_of_lung	CTCF_fibroblast_of_lung	Data format
	dense	CTCF_fibroblast_of_mammary_gland	CTCF_fibroblast_of_mammary_gland	Data format
	dense	CTCF_fibroblast_of_pulmonary_artery	CTCF_fibroblast_of_pulmonary_artery	Data format
	dense	CTCF_fibroblast_of_the_aortic_adventitia	CTCF_fibroblast_of_the_aortic_adventitia	Data format
	dense	CTCF_fibroblast_of_villous_mesenchyme	CTCF_fibroblast_of_villous_mesenchyme	Data format
	dense	CTCF_foreskin_fibroblast	CTCF_foreskin_fibroblast	Data format
	dense	CTCF_foreskin_keratinocyte	CTCF_foreskin_keratinocyte	Data format
	dense	CTCF_gastrocnemius_medialis	CTCF_gastrocnemius_medialis	Data format
	dense	CTCF_gastroesophageal_sphincter	CTCF_gastroesophageal_sphincter	Data format
	dense	CTCF_GM12878	CTCF_GM12878	Data format
	dense	CTCF_GM23338	CTCF_GM23338	Data format
	dense	CTCF_H1-hESC	CTCF_H1-hESC	Data format
	dense	CTCF_H54	CTCF_H54	Data format
	dense	CTCF_HCT116	CTCF_HCT116	Data format
	dense	CTCF_heart_left_ventricle	CTCF_heart_left_ventricle	Data format
	dense	CTCF_hepatocyte	CTCF_hepatocyte	Data format
	dense	CTCF_HepG2	CTCF_HepG2	Data format
	dense	CTCF_HFF-Myc	CTCF_HFF-Myc	Data format
	dense	CTCF_HL-60	CTCF_HL-60	Data format
	dense	CTCF_IMR-90	CTCF_IMR-90	Data format
	dense	CTCF_Ishikawa	CTCF_Ishikawa	Data format
	dense	CTCF_K562	CTCF_K562	Data format
	dense	CTCF_keratinocyte	CTCF_keratinocyte	Data format
	dense	CTCF_kidney_epithelial_cell	CTCF_kidney_epithelial_cell	Data format
	dense	CTCF_KMS-11	CTCF_KMS-11	Data format
	dense	CTCF_liver	CTCF_liver	Data format
	dense	CTCF_LNCAP	CTCF_LNCAP	Data format
	dense	CTCF_LNCaP_clone_FGC	CTCF_LNCaP_clone_FGC	Data format
	dense	CTCF_Loucy	CTCF_Loucy	Data format
	dense	CTCF_lower_leg_skin	CTCF_lower_leg_skin	Data format
	dense	CTCF_mammary_epithelial_cell	CTCF_mammary_epithelial_cell	Data format
	dense	CTCF_MCF-7	CTCF_MCF-7	Data format
	dense	CTCF_medulloblastoma	CTCF_medulloblastoma	Data format
	dense	CTCF_myotube	CTCF_myotube	Data format
	dense	CTCF_NB4	CTCF_NB4	Data format
	dense	CTCF_NCI-H929	CTCF_NCI-H929	Data format
	dense	CTCF_neural_cell	CTCF_neural_cell	Data format
	dense	CTCF_neural_progenitor_cell	CTCF_neural_progenitor_cell	Data format
	dense	CTCF_neutrophil	CTCF_neutrophil	Data format
	dense	CTCF_OCI-LY1	CTCF_OCI-LY1	Data format
	dense	CTCF_OCI-LY3	CTCF_OCI-LY3	Data format
	dense	CTCF_OCI-LY7	CTCF_OCI-LY7	Data format
	dense	CTCF_omental_fat_pad	CTCF_omental_fat_pad	Data format
	dense	CTCF_ovary	CTCF_ovary	Data format
	dense	CTCF_Panc1	CTCF_Panc1	Data format
	dense	CTCF_Parathyroid_adenoma	CTCF_Parathyroid_adenoma	Data format
	dense	CTCF_PC-3	CTCF_PC-3	Data format
	dense	CTCF_PC-9	CTCF_PC-9	Data format
	dense	CTCF_Peyer's_patch	CTCF_Peyer's_patch	Data format
	dense	CTCF_prostate_gland	CTCF_prostate_gland	Data format
	dense	CTCF_retinal_pigment_epithelial_cell	CTCF_retinal_pigment_epithelial_cell	Data format
	dense	CTCF_right_lobe_of_liver	CTCF_right_lobe_of_liver	Data format
	dense	CTCF_RWPE1	CTCF_RWPE1	Data format
	dense	CTCF_RWPE2	CTCF_RWPE2	Data format
	dense	CTCF_sigmoid_colon	CTCF_sigmoid_colon	Data format
	dense	CTCF_SK-N-SH	CTCF_SK-N-SH	Data format
	dense	CTCF_smooth_muscle_cell	CTCF_smooth_muscle_cell	Data format
	dense	CTCF_spleen	CTCF_spleen	Data format
	dense	CTCF_stomach	CTCF_stomach	Data format
	dense	CTCF_SU-DHL-6	CTCF_SU-DHL-6	Data format
	dense	CTCF_subcutaneous_adipose_tissue	CTCF_subcutaneous_adipose_tissue	Data format
	dense	CTCF_suprapubic_skin	CTCF_suprapubic_skin	Data format
	dense	CTCF_testis	CTCF_testis	Data format
	dense	CTCF_thyroid_gland	CTCF_thyroid_gland	Data format
	dense	CTCF_tibial_artery	CTCF_tibial_artery	Data format
	dense	CTCF_tibial_nerve	CTCF_tibial_nerve	Data format
	dense	CTCF_transverse_colon	CTCF_transverse_colon	Data format
	dense	CTCF_upper_lobe_of_left_lung	CTCF_upper_lobe_of_left_lung	Data format
	dense	CTCF_uterus	CTCF_uterus	Data format
	dense	CTCF_vagina	CTCF_vagina	Data format
	dense	CTCF_VCaP	CTCF_VCaP	Data format
	dense	CTCF_WERI-Rb-1	CTCF_WERI-Rb-1	Data format
	dense	CTCF_WI38	CTCF_WI38	Data format
	dense	CUX1_K562	CUX1_K562	Data format
	dense	CUX1_MCF-7	CUX1_MCF-7	Data format
	dense	DACH1_K562	DACH1_K562	Data format
	dense	DEAF1_K562	DEAF1_K562	Data format
	dense	DNMT1_K562	DNMT1_K562	Data format
	dense	DPF2_K562	DPF2_K562	Data format
	dense	DPF2_MCF-7	DPF2_MCF-7	Data format
	dense	E2F1_K562	E2F1_K562	Data format
	dense	E2F6_K562	E2F6_K562	Data format
	dense	E2F7_K562	E2F7_K562	Data format
	dense	E2F8_GM12878	E2F8_GM12878	Data format
	dense	E2F8_K562	E2F8_K562	Data format
	dense	E2F8_MCF-7	E2F8_MCF-7	Data format
	dense	E4F1_GM12878	E4F1_GM12878	Data format
	dense	E4F1_K562	E4F1_K562	Data format
	dense	E4F1_MCF-7	E4F1_MCF-7	Data format
	dense	EBF1_GM12878	EBF1_GM12878	Data format
	dense	EGR1_GM12878	EGR1_GM12878	Data format
	dense	EGR1_H1-hESC	EGR1_H1-hESC	Data format
	dense	EGR1_K562	EGR1_K562	Data format
	dense	EGR1_liver	EGR1_liver	Data format
	dense	EHMT2_A549	EHMT2_A549	Data format
	dense	EHMT2_HepG2	EHMT2_HepG2	Data format
	dense	EHMT2_K562	EHMT2_K562	Data format
	dense	ELF1_A549	ELF1_A549	Data format
	dense	ELF1_GM12878	ELF1_GM12878	Data format
	dense	ELF1_HepG2	ELF1_HepG2	Data format
	dense	ELF1_K562	ELF1_K562	Data format
	dense	ELF1_MCF-7	ELF1_MCF-7	Data format
	dense	ELF4_HEK293T	ELF4_HEK293T	Data format
	dense	ELF4_K562	ELF4_K562	Data format
	dense	ELK1_MCF-7	ELK1_MCF-7	Data format
	dense	EP300_breast_epithelium	EP300_breast_epithelium	Data format
	dense	EP300_esophagus_muscularis_mucosa	EP300_esophagus_muscularis_mucosa	Data format
	dense	EP300_omental_fat_pad	EP300_omental_fat_pad	Data format
	dense	EP300_ovary	EP300_ovary	Data format
	dense	EP300_sigmoid_colon	EP300_sigmoid_colon	Data format
	dense	EP300_subcutaneous_adipose_tissue	EP300_subcutaneous_adipose_tissue	Data format
	dense	EP300_testis	EP300_testis	Data format
	dense	EP300_tibial_nerve	EP300_tibial_nerve	Data format
	dense	EP400_K562	EP400_K562	Data format
	dense	ESR1_Ishikawa	ESR1_Ishikawa	Data format
	dense	ESR1_T47D	ESR1_T47D	Data format
	dense	ESRRA_A549	ESRRA_A549	Data format
	dense	ESRRA_GM12878	ESRRA_GM12878	Data format
	dense	ESRRA_K562	ESRRA_K562	Data format
	dense	ESRRA_MCF-7	ESRRA_MCF-7	Data format
	dense	ETS1_A549	ETS1_A549	Data format
	dense	ETS1_GM12878	ETS1_GM12878	Data format
	dense	ETS1_GM23338	ETS1_GM23338	Data format
	dense	ETS1_HepG2	ETS1_HepG2	Data format
	dense	ETS1_K562	ETS1_K562	Data format
	dense	ETV4_HepG2	ETV4_HepG2	Data format
	dense	ETV6_K562	ETV6_K562	Data format
	dense	EWSR1_K562	EWSR1_K562	Data format
	dense	EZH2_A673	EZH2_A673	Data format
	dense	EZH2_GM12878	EZH2_GM12878	Data format
	dense	EZH2_GM23248	EZH2_GM23248	Data format
	dense	EZH2_GM23338	EZH2_GM23338	Data format
	dense	EZH2_HCT116	EZH2_HCT116	Data format
	dense	EZH2_HeLa-S3	EZH2_HeLa-S3	Data format
	dense	EZH2_hepatocyte	EZH2_hepatocyte	Data format
	dense	EZH2_HepG2	EZH2_HepG2	Data format
	dense	EZH2_neural_cell	EZH2_neural_cell	Data format
	dense	EZH2_neural_progenitor_cell	EZH2_neural_progenitor_cell	Data format
	dense	EZH2_OCI-LY1	EZH2_OCI-LY1	Data format
	dense	EZH2_PC-3	EZH2_PC-3	Data format
	dense	EZH2_PC-9	EZH2_PC-9	Data format
	dense	EZH2_SK-N-MC	EZH2_SK-N-MC	Data format
	dense	FIP1L1_HepG2	FIP1L1_HepG2	Data format
	dense	FIP1L1_K562	FIP1L1_K562	Data format
	dense	FOS_endothelial_cell_of_umbilical_vein	FOS_endothelial_cell_of_umbilical_vein	Data format
	dense	FOS_IMR-90	FOS_IMR-90	Data format
	dense	FOS_MCF-7	FOS_MCF-7	Data format
	dense	FOS_MCF_10A	FOS_MCF_10A	Data format
	dense	FOSL1_H1-hESC	FOSL1_H1-hESC	Data format
	dense	FOSL1_K562	FOSL1_K562	Data format
	dense	FOSL2_A549	FOSL2_A549	Data format
	dense	FOSL2_HepG2	FOSL2_HepG2	Data format
	dense	FOXA1_A549	FOXA1_A549	Data format
	dense	FOXA1_HEK293T	FOXA1_HEK293T	Data format
	dense	FOXA1_HepG2	FOXA1_HepG2	Data format
	dense	FOXA1_K562	FOXA1_K562	Data format
	dense	FOXA1_liver	FOXA1_liver	Data format
	dense	FOXA1_MCF-7	FOXA1_MCF-7	Data format
	dense	FOXA1_T47D	FOXA1_T47D	Data format
	dense	FOXA2_HepG2	FOXA2_HepG2	Data format
	dense	FOXA2_liver	FOXA2_liver	Data format
	dense	FOXK2_GM12878	FOXK2_GM12878	Data format
	dense	FOXK2_HEK293T	FOXK2_HEK293T	Data format
	dense	FOXK2_HepG2	FOXK2_HepG2	Data format
	dense	FOXK2_K562	FOXK2_K562	Data format
	dense	FOXK2_MCF-7	FOXK2_MCF-7	Data format
	dense	FOXM1_HEK293T	FOXM1_HEK293T	Data format
	dense	FOXM1_K562	FOXM1_K562	Data format
	dense	FOXP1_HepG2	FOXP1_HepG2	Data format
	dense	FUS_HepG2	FUS_HepG2	Data format
	dense	FUS_K562	FUS_K562	Data format
	dense	GABPA_A549	GABPA_A549	Data format
	dense	GABPA_GM12878	GABPA_GM12878	Data format
	dense	GABPA_H1-hESC	GABPA_H1-hESC	Data format
	dense	GABPA_HeLa-S3	GABPA_HeLa-S3	Data format
	dense	GABPA_HepG2	GABPA_HepG2	Data format
	dense	GABPA_HL-60	GABPA_HL-60	Data format
	dense	GABPA_K562	GABPA_K562	Data format
	dense	GABPA_liver	GABPA_liver	Data format
	dense	GABPB1_K562	GABPB1_K562	Data format
	dense	GATA1_erythroblast	GATA1_erythroblast	Data format
	dense	GATA1_K562	GATA1_K562	Data format
	dense	GATA2_endothelial_cell_of_umbilical_vein	GATA2_endothelial_cell_of_umbilical_vein	Data format
	dense	GATA2_K562	GATA2_K562	Data format
	dense	GATA2_SH-SY5Y	GATA2_SH-SY5Y	Data format
	dense	GATA3_MCF-7	GATA3_MCF-7	Data format
	dense	GATA3_SH-SY5Y	GATA3_SH-SY5Y	Data format
	dense	GATA3_T47D	GATA3_T47D	Data format
	dense	GATA4_HepG2	GATA4_HepG2	Data format
	dense	GATAD2A_K562	GATAD2A_K562	Data format
	dense	GATAD2B_K562	GATAD2B_K562	Data format
	dense	GATAD2B_MCF-7	GATAD2B_MCF-7	Data format
	dense	GMEB1_K562	GMEB1_K562	Data format
	dense	HCFC1_GM12878	HCFC1_GM12878	Data format
	dense	HCFC1_HepG2	HCFC1_HepG2	Data format
	dense	HCFC1_K562	HCFC1_K562	Data format
	dense	HCFC1_MCF-7	HCFC1_MCF-7	Data format
	dense	HDAC1_HepG2	HDAC1_HepG2	Data format
	dense	HDAC1_K562	HDAC1_K562	Data format
	dense	HDAC2_A549	HDAC2_A549	Data format
	dense	HDAC2_H1-hESC	HDAC2_H1-hESC	Data format
	dense	HDAC2_HepG2	HDAC2_HepG2	Data format
	dense	HDAC2_K562	HDAC2_K562	Data format
	dense	HDAC3_K562	HDAC3_K562	Data format
	dense	HDAC6_H1-hESC	HDAC6_H1-hESC	Data format
	dense	HDAC6_HepG2	HDAC6_HepG2	Data format
	dense	HDAC6_K562	HDAC6_K562	Data format
	dense	HES1_K562	HES1_K562	Data format
	dense	HES1_MCF-7	HES1_MCF-7	Data format
	dense	HMBOX1_K562	HMBOX1_K562	Data format
	dense	HNF1A_HepG2	HNF1A_HepG2	Data format
	dense	HNF4A_HepG2	HNF4A_HepG2	Data format
	dense	HNF4A_liver	HNF4A_liver	Data format
	dense	HNF4G_HepG2	HNF4G_HepG2	Data format
	dense	HNF4G_liver	HNF4G_liver	Data format
	dense	HNRNPH1_HepG2	HNRNPH1_HepG2	Data format
	dense	HNRNPH1_K562	HNRNPH1_K562	Data format
	dense	HNRNPK_HepG2	HNRNPK_HepG2	Data format
	dense	HNRNPK_K562	HNRNPK_K562	Data format
	dense	HNRNPL_HepG2	HNRNPL_HepG2	Data format
	dense	HNRNPL_K562	HNRNPL_K562	Data format
	dense	HNRNPLL_HepG2	HNRNPLL_HepG2	Data format
	dense	HNRNPLL_K562	HNRNPLL_K562	Data format
	dense	HNRNPUL1_HepG2	HNRNPUL1_HepG2	Data format
	dense	HNRNPUL1_K562	HNRNPUL1_K562	Data format
	dense	HSF1_MCF-7	HSF1_MCF-7	Data format
	dense	IKZF1_HepG2	IKZF1_HepG2	Data format
	dense	IKZF1_K562	IKZF1_K562	Data format
	dense	IRF1_K562	IRF1_K562	Data format
	dense	IRF2_K562	IRF2_K562	Data format
	dense	IRF3_SK-N-SH	IRF3_SK-N-SH	Data format
	dense	IRF5_GM12878	IRF5_GM12878	Data format
	dense	JUN_A549	JUN_A549	Data format
	dense	JUN_H1-hESC	JUN_H1-hESC	Data format
	dense	JUN_K562	JUN_K562	Data format
	dense	JUN_MCF-7	JUN_MCF-7	Data format
	dense	JUNB_K562	JUNB_K562	Data format
	dense	JUND_A549	JUND_A549	Data format
	dense	JUND_GM12878	JUND_GM12878	Data format
	dense	JUND_H1-hESC	JUND_H1-hESC	Data format
	dense	JUND_HCT116	JUND_HCT116	Data format
	dense	JUND_HepG2	JUND_HepG2	Data format
	dense	JUND_K562	JUND_K562	Data format
	dense	JUND_liver	JUND_liver	Data format
	dense	JUND_MCF-7	JUND_MCF-7	Data format
	dense	JUND_SK-N-SH	JUND_SK-N-SH	Data format
	dense	JUND_T47D	JUND_T47D	Data format
	dense	KAT2A_GM12878	KAT2A_GM12878	Data format
	dense	KAT2B_K562	KAT2B_K562	Data format
	dense	KAT8_K562	KAT8_K562	Data format
	dense	KDM1A_GM12878	KDM1A_GM12878	Data format
	dense	KDM1A_H1-hESC	KDM1A_H1-hESC	Data format
	dense	KDM1A_HepG2	KDM1A_HepG2	Data format
	dense	KDM1A_K562	KDM1A_K562	Data format
	dense	KDM4A_H1-hESC	KDM4A_H1-hESC	Data format
	dense	KDM4B_K562	KDM4B_K562	Data format
	dense	KDM5A_A549	KDM5A_A549	Data format
	dense	KDM5A_H1-hESC	KDM5A_H1-hESC	Data format
	dense	KDM5A_HepG2	KDM5A_HepG2	Data format
	dense	KDM5B_K562	KDM5B_K562	Data format
	dense	KLF16_K562	KLF16_K562	Data format
	dense	L3MBTL2_HEK293T	L3MBTL2_HEK293T	Data format
	dense	L3MBTL2_K562	L3MBTL2_K562	Data format
	dense	LCORL_HepG2	LCORL_HepG2	Data format
	dense	LEF1_HEK293T	LEF1_HEK293T	Data format
	dense	LEF1_K562	LEF1_K562	Data format
	dense	MAFF_HeLa-S3	MAFF_HeLa-S3	Data format
	dense	MAFF_HepG2	MAFF_HepG2	Data format
	dense	MAFF_K562	MAFF_K562	Data format
	dense	MAFK_A549	MAFK_A549	Data format
	dense	MAFK_H1-hESC	MAFK_H1-hESC	Data format
	dense	MAFK_HeLa-S3	MAFK_HeLa-S3	Data format
	dense	MAFK_HepG2	MAFK_HepG2	Data format
	dense	MAFK_IMR-90	MAFK_IMR-90	Data format
	dense	MAFK_K562	MAFK_K562	Data format
	dense	MAFK_MCF-7	MAFK_MCF-7	Data format
	dense	MAX_HepG2	MAX_HepG2	Data format
	dense	MAX_K562	MAX_K562	Data format
	dense	MAX_liver	MAX_liver	Data format
	dense	MBD2_K562	MBD2_K562	Data format
	dense	MBD2_MCF-7	MBD2_MCF-7	Data format
	dense	MCM2_K562	MCM2_K562	Data format
	dense	MCM3_K562	MCM3_K562	Data format
	dense	MCM5_K562	MCM5_K562	Data format
	dense	MCM7_K562	MCM7_K562	Data format
	dense	MEF2A_K562	MEF2A_K562	Data format
	dense	MEIS2_K562	MEIS2_K562	Data format
	dense	MGA_K562	MGA_K562	Data format
	dense	MIER1_K562	MIER1_K562	Data format
	dense	MITF_K562	MITF_K562	Data format
	dense	MLLT1_K562	MLLT1_K562	Data format
	dense	MLLT1_MCF-7	MLLT1_MCF-7	Data format
	dense	MTA1_K562	MTA1_K562	Data format
	dense	MTA1_MCF-7	MTA1_MCF-7	Data format
	dense	MTA2_K562	MTA2_K562	Data format
	dense	MTA2_MCF-7	MTA2_MCF-7	Data format
	dense	MTA3_K562	MTA3_K562	Data format
	dense	MTA3_MCF-7	MTA3_MCF-7	Data format
	dense	MXI1_K562	MXI1_K562	Data format
	dense	MXI1_neural_cell	MXI1_neural_cell	Data format
	dense	MXI1_SK-N-SH	MXI1_SK-N-SH	Data format
	dense	MYBL2_K562	MYBL2_K562	Data format
	dense	MYC_A549	MYC_A549	Data format
	dense	MYC_H1-hESC	MYC_H1-hESC	Data format
	dense	MYC_K562	MYC_K562	Data format
	dense	MYC_MCF-7	MYC_MCF-7	Data format
	dense	MYC_MCF_10A	MYC_MCF_10A	Data format
	dense	MYNN_K562	MYNN_K562	Data format
	dense	NANOG_GM23338	NANOG_GM23338	Data format
	dense	NANOG_H1-hESC	NANOG_H1-hESC	Data format
	dense	NBN_GM12878	NBN_GM12878	Data format
	dense	NBN_HepG2	NBN_HepG2	Data format
	dense	NBN_K562	NBN_K562	Data format
	dense	NBN_MCF-7	NBN_MCF-7	Data format
	dense	NCOA1_K562	NCOA1_K562	Data format
	dense	NCOA2_K562	NCOA2_K562	Data format
	dense	NCOA3_MCF-7	NCOA3_MCF-7	Data format
	dense	NCOA4_K562	NCOA4_K562	Data format
	dense	NCOA6_K562	NCOA6_K562	Data format
	dense	NCOR1_HepG2	NCOR1_HepG2	Data format
	dense	NCOR1_K562	NCOR1_K562	Data format
	dense	NEUROD1_K562	NEUROD1_K562	Data format
	dense	NEUROD1_MCF-7	NEUROD1_MCF-7	Data format
	dense	NFATC3_K562	NFATC3_K562	Data format
	dense	NFE2_GM12878	NFE2_GM12878	Data format
	dense	NFE2_K562	NFE2_K562	Data format
	dense	NFE2L2_A549	NFE2L2_A549	Data format
	dense	NFE2L2_HeLa-S3	NFE2L2_HeLa-S3	Data format
	dense	NFE2L2_HepG2	NFE2L2_HepG2	Data format
	dense	NFE2L2_IMR-90	NFE2L2_IMR-90	Data format
	dense	NFIB_MCF-7	NFIB_MCF-7	Data format
	dense	NFIC_K562	NFIC_K562	Data format
	dense	NFRKB_HEK293T	NFRKB_HEK293T	Data format
	dense	NFRKB_HepG2	NFRKB_HepG2	Data format
	dense	NFRKB_K562	NFRKB_K562	Data format
	dense	NFRKB_MCF-7	NFRKB_MCF-7	Data format
	dense	NFXL1_GM12878	NFXL1_GM12878	Data format
	dense	NFXL1_K562	NFXL1_K562	Data format
	dense	NFXL1_MCF-7	NFXL1_MCF-7	Data format
	dense	NFYA_GM12878	NFYA_GM12878	Data format
	dense	NFYB_GM12878	NFYB_GM12878	Data format
	dense	NR0B1_K562	NR0B1_K562	Data format
	dense	NR2C1_K562	NR2C1_K562	Data format
	dense	NR2C2_GM12878	NR2C2_GM12878	Data format
	dense	NR2C2_K562	NR2C2_K562	Data format
	dense	NR2F1_K562	NR2F1_K562	Data format
	dense	NR2F2_K562	NR2F2_K562	Data format
	dense	NR2F2_liver	NR2F2_liver	Data format
	dense	NR2F6_HepG2	NR2F6_HepG2	Data format
	dense	NR2F6_K562	NR2F6_K562	Data format
	dense	NR3C1_A549	NR3C1_A549	Data format
	dense	NR3C1_Ishikawa	NR3C1_Ishikawa	Data format
	dense	NR3C1_K562	NR3C1_K562	Data format
	dense	NRF1_GM12878	NRF1_GM12878	Data format
	dense	NRF1_H1-hESC	NRF1_H1-hESC	Data format
	dense	NRF1_HepG2	NRF1_HepG2	Data format
	dense	NRF1_K562	NRF1_K562	Data format
	dense	NRF1_MCF-7	NRF1_MCF-7	Data format
	dense	NUFIP1_K562	NUFIP1_K562	Data format
	dense	PAX8_GM12878	PAX8_GM12878	Data format
	dense	PAX8_MCF-7	PAX8_MCF-7	Data format
	dense	PCBP1_HepG2	PCBP1_HepG2	Data format
	dense	PCBP1_K562	PCBP1_K562	Data format
	dense	PCBP2_HepG2	PCBP2_HepG2	Data format
	dense	PCBP2_K562	PCBP2_K562	Data format
	dense	PHB2_HepG2	PHB2_HepG2	Data format
	dense	PHB2_K562	PHB2_K562	Data format
	dense	PHF20_K562	PHF20_K562	Data format
	dense	PHF21A_K562	PHF21A_K562	Data format
	dense	PHF8_A549	PHF8_A549	Data format
	dense	PHF8_H1-hESC	PHF8_H1-hESC	Data format
	dense	PHF8_HepG2	PHF8_HepG2	Data format
	dense	PHF8_K562	PHF8_K562	Data format
	dense	PKNOX1_GM12878	PKNOX1_GM12878	Data format
	dense	PKNOX1_HEK293T	PKNOX1_HEK293T	Data format
	dense	PKNOX1_K562	PKNOX1_K562	Data format
	dense	PKNOX1_MCF-7	PKNOX1_MCF-7	Data format
	dense	PLRG1_HepG2	PLRG1_HepG2	Data format
	dense	PML_K562	PML_K562	Data format
	dense	POLR2A_breast_epithelium	POLR2A_breast_epithelium	Data format
	dense	POLR2A_H1-hESC	POLR2A_H1-hESC	Data format
	dense	POLR2A_HeLa-S3	POLR2A_HeLa-S3	Data format
	dense	POLR2A_MCF-7	POLR2A_MCF-7	Data format
	dense	POLR2A_MCF_10A	POLR2A_MCF_10A	Data format
	dense	POLR2A_Peyer's_patch	POLR2A_Peyer's_patch	Data format
	dense	POLR2A_right_lobe_of_liver	POLR2A_right_lobe_of_liver	Data format
	dense	POLR2A_spleen	POLR2A_spleen	Data format
	dense	POLR2A_tibial_nerve	POLR2A_tibial_nerve	Data format
	dense	POLR2A_uterus	POLR2A_uterus	Data format
	dense	POLR2A_vagina	POLR2A_vagina	Data format
	dense	POLR2G_HepG2	POLR2G_HepG2	Data format
	dense	POLR2G_K562	POLR2G_K562	Data format
	dense	POU2F2_GM12891	POU2F2_GM12891	Data format
	dense	PRDM10_K562	PRDM10_K562	Data format
	dense	PRPF4_HepG2	PRPF4_HepG2	Data format
	dense	PRPF4_K562	PRPF4_K562	Data format
	dense	PTBP1_HepG2	PTBP1_HepG2	Data format
	dense	PTBP1_K562	PTBP1_K562	Data format
	dense	PYGO2_K562	PYGO2_K562	Data format
	dense	RAD21_A549	RAD21_A549	Data format
	dense	RAD21_GM12878	RAD21_GM12878	Data format
	dense	RAD21_H1-hESC	RAD21_H1-hESC	Data format
	dense	RAD21_HepG2	RAD21_HepG2	Data format
	dense	RAD21_IMR-90	RAD21_IMR-90	Data format
	dense	RAD21_liver	RAD21_liver	Data format
	dense	RAD21_neural_cell	RAD21_neural_cell	Data format
	dense	RAD21_SK-N-SH	RAD21_SK-N-SH	Data format
	dense	RAD51_GM12878	RAD51_GM12878	Data format
	dense	RAD51_HepG2	RAD51_HepG2	Data format
	dense	RAD51_K562	RAD51_K562	Data format
	dense	RAD51_MCF-7	RAD51_MCF-7	Data format
	dense	RB1_GM12878	RB1_GM12878	Data format
	dense	RB1_K562	RB1_K562	Data format
	dense	RBBP5_H1-hESC	RBBP5_H1-hESC	Data format
	dense	RBFOX2_HepG2	RBFOX2_HepG2	Data format
	dense	RBFOX2_K562	RBFOX2_K562	Data format
	dense	RBM14_K562	RBM14_K562	Data format
	dense	RBM15_K562	RBM15_K562	Data format
	dense	RBM17_K562	RBM17_K562	Data format
	dense	RBM22_HepG2	RBM22_HepG2	Data format
	dense	RBM22_K562	RBM22_K562	Data format
	dense	RBM25_K562	RBM25_K562	Data format
	dense	RBM34_K562	RBM34_K562	Data format
	dense	RBM39_HepG2	RBM39_HepG2	Data format
	dense	RBM39_K562	RBM39_K562	Data format
	dense	RCOR1_A549	RCOR1_A549	Data format
	dense	RCOR1_HepG2	RCOR1_HepG2	Data format
	dense	RCOR1_IMR-90	RCOR1_IMR-90	Data format
	dense	RCOR1_K562	RCOR1_K562	Data format
	dense	RCOR1_MCF-7	RCOR1_MCF-7	Data format
	dense	RCOR1_SK-N-SH	RCOR1_SK-N-SH	Data format
	dense	RELB_GM12878	RELB_GM12878	Data format
	dense	REST_A549	REST_A549	Data format
	dense	REST_GM23338	REST_GM23338	Data format
	dense	REST_H1-hESC	REST_H1-hESC	Data format
	dense	REST_HepG2	REST_HepG2	Data format
	dense	REST_HL-60	REST_HL-60	Data format
	dense	REST_K562	REST_K562	Data format
	dense	REST_liver	REST_liver	Data format
	dense	REST_Panc1	REST_Panc1	Data format
	dense	REST_PFSK-1	REST_PFSK-1	Data format
	dense	REST_SK-N-SH	REST_SK-N-SH	Data format
	dense	RFX1_HepG2	RFX1_HepG2	Data format
	dense	RFX1_K562	RFX1_K562	Data format
	dense	RFX1_MCF-7	RFX1_MCF-7	Data format
	dense	RFX5_A549	RFX5_A549	Data format
	dense	RFX5_H1-hESC	RFX5_H1-hESC	Data format
	dense	RFX5_HepG2	RFX5_HepG2	Data format
	dense	RFX5_K562	RFX5_K562	Data format
	dense	RFX5_MCF-7	RFX5_MCF-7	Data format
	dense	RFX5_SK-N-SH	RFX5_SK-N-SH	Data format
	dense	RLF_K562	RLF_K562	Data format
	dense	RNF2_A549	RNF2_A549	Data format
	dense	RNF2_H1-hESC	RNF2_H1-hESC	Data format
	dense	RNF2_HepG2	RNF2_HepG2	Data format
	dense	RNF2_K562	RNF2_K562	Data format
	dense	RUNX1_K562	RUNX1_K562	Data format
	dense	RXRA_H1-hESC	RXRA_H1-hESC	Data format
	dense	RXRA_HepG2	RXRA_HepG2	Data format
	dense	RXRA_liver	RXRA_liver	Data format
	dense	SAFB2_K562	SAFB2_K562	Data format
	dense	SAFB_K562	SAFB_K562	Data format
	dense	SAP30_H1-hESC	SAP30_H1-hESC	Data format
	dense	SAP30_K562	SAP30_K562	Data format
	dense	SETDB1_K562	SETDB1_K562	Data format
	dense	SIN3A_A549	SIN3A_A549	Data format
	dense	SIN3A_GM12878	SIN3A_GM12878	Data format
	dense	SIN3A_H1-hESC	SIN3A_H1-hESC	Data format
	dense	SIN3A_HepG2	SIN3A_HepG2	Data format
	dense	SIN3A_K562	SIN3A_K562	Data format
	dense	SIN3A_MCF-7	SIN3A_MCF-7	Data format
	dense	SIN3A_SK-N-SH	SIN3A_SK-N-SH	Data format
	dense	SIN3B_HepG2	SIN3B_HepG2	Data format
	dense	SIN3B_K562	SIN3B_K562	Data format
	dense	SIRT6_H1-hESC	SIRT6_H1-hESC	Data format
	dense	SIRT6_K562	SIRT6_K562	Data format
	dense	SIX4_MCF-7	SIX4_MCF-7	Data format
	dense	SIX5_A549	SIX5_A549	Data format
	dense	SIX5_H1-hESC	SIX5_H1-hESC	Data format
	dense	SIX5_K562	SIX5_K562	Data format
	dense	SKI_HepG2	SKI_HepG2	Data format
	dense	SKIL_K562	SKIL_K562	Data format
	dense	SMAD1_GM12878	SMAD1_GM12878	Data format
	dense	SMAD1_K562	SMAD1_K562	Data format
	dense	SMAD2_K562	SMAD2_K562	Data format
	dense	SMAD5_K562	SMAD5_K562	Data format
	dense	SMARCA4_bipolar_neuron	SMARCA4_bipolar_neuron	Data format
	dense	SMARCA4_K562	SMARCA4_K562	Data format
	dense	SMARCA5_GM12878	SMARCA5_GM12878	Data format
	dense	SMARCA5_K562	SMARCA5_K562	Data format
	dense	SMARCA5_MCF-7	SMARCA5_MCF-7	Data format
	dense	SMARCB1_K562	SMARCB1_K562	Data format
	dense	SMARCC2_HepG2	SMARCC2_HepG2	Data format
	dense	SMARCC2_K562	SMARCC2_K562	Data format
	dense	SMARCE1_HepG2	SMARCE1_HepG2	Data format
	dense	SMARCE1_K562	SMARCE1_K562	Data format
	dense	SMARCE1_MCF-7	SMARCE1_MCF-7	Data format
	dense	SMC3_A549	SMC3_A549	Data format
	dense	SMC3_HepG2	SMC3_HepG2	Data format
	dense	SMC3_IMR-90	SMC3_IMR-90	Data format
	dense	SMC3_K562	SMC3_K562	Data format
	dense	SMC3_neural_cell	SMC3_neural_cell	Data format
	dense	SNRNP70_HepG2	SNRNP70_HepG2	Data format
	dense	SNRNP70_K562	SNRNP70_K562	Data format
	dense	SOX13_HepG2	SOX13_HepG2	Data format
	dense	SOX6_HepG2	SOX6_HepG2	Data format
	dense	SOX6_K562	SOX6_K562	Data format
	dense	SP1_A549	SP1_A549	Data format
	dense	SP1_H1-hESC	SP1_H1-hESC	Data format
	dense	SP1_HEK293T	SP1_HEK293T	Data format
	dense	SP1_HepG2	SP1_HepG2	Data format
	dense	SP1_K562	SP1_K562	Data format
	dense	SP1_liver	SP1_liver	Data format
	dense	SP1_MCF-7	SP1_MCF-7	Data format
	dense	SPI1_GM12891	SPI1_GM12891	Data format
	dense	SPI1_HL-60	SPI1_HL-60	Data format
	dense	SREBF1_A549	SREBF1_A549	Data format
	dense	SREBF1_K562	SREBF1_K562	Data format
	dense	SREBF1_MCF-7	SREBF1_MCF-7	Data format
	dense	SREBF2_A549	SREBF2_A549	Data format
	dense	SREBF2_HeLa-S3	SREBF2_HeLa-S3	Data format
	dense	SRF_H1-hESC	SRF_H1-hESC	Data format
	dense	SRSF4_HepG2	SRSF4_HepG2	Data format
	dense	SRSF7_K562	SRSF7_K562	Data format
	dense	SRSF9_HepG2	SRSF9_HepG2	Data format
	dense	SRSF9_K562	SRSF9_K562	Data format
	dense	STAT1_K562	STAT1_K562	Data format
	dense	STAT2_K562	STAT2_K562	Data format
	dense	STAT3_MCF_10A	STAT3_MCF_10A	Data format
	dense	STAT5A_K562	STAT5A_K562	Data format
	dense	SUPT20H_GM12878	SUPT20H_GM12878	Data format
	dense	SUPT20H_HeLa-S3	SUPT20H_HeLa-S3	Data format
	dense	SUZ12_H1-hESC	SUZ12_H1-hESC	Data format
	dense	SUZ12_HEK293T	SUZ12_HEK293T	Data format
	dense	SUZ12_HepG2	SUZ12_HepG2	Data format
	dense	SUZ12_K562	SUZ12_K562	Data format
	dense	SUZ12_MCF-7	SUZ12_MCF-7	Data format
	dense	TAF1_A549	TAF1_A549	Data format
	dense	TAF1_GM12891	TAF1_GM12891	Data format
	dense	TAF1_HepG2	TAF1_HepG2	Data format
	dense	TAF1_liver	TAF1_liver	Data format
	dense	TAF1_MCF-7	TAF1_MCF-7	Data format
	dense	TAF1_PFSK-1	TAF1_PFSK-1	Data format
	dense	TAF1_SK-N-SH	TAF1_SK-N-SH	Data format
	dense	TAF7_H1-hESC	TAF7_H1-hESC	Data format
	dense	TAF7_K562	TAF7_K562	Data format
	dense	TAF9B_K562	TAF9B_K562	Data format
	dense	TAL1_K562	TAL1_K562	Data format
	dense	TBL1XR1_HepG2	TBL1XR1_HepG2	Data format
	dense	TBL1XR1_K562	TBL1XR1_K562	Data format
	dense	TBP_H1-hESC	TBP_H1-hESC	Data format
	dense	TBP_HeLa-S3	TBP_HeLa-S3	Data format
	dense	TBP_HepG2	TBP_HepG2	Data format
	dense	TBP_K562	TBP_K562	Data format
	dense	TBX21_GM12878	TBX21_GM12878	Data format
	dense	TBX3_HepG2	TBX3_HepG2	Data format
	dense	TCF12_A549	TCF12_A549	Data format
	dense	TCF12_H1-hESC	TCF12_H1-hESC	Data format
	dense	TCF12_HepG2	TCF12_HepG2	Data format
	dense	TCF12_K562	TCF12_K562	Data format
	dense	TCF7L2_Panc1	TCF7L2_Panc1	Data format
	dense	TEAD4_K562	TEAD4_K562	Data format
	dense	TFAP4_HepG2	TFAP4_HepG2	Data format
	dense	THAP1_K562	THAP1_K562	Data format
	dense	THRA_K562	THRA_K562	Data format
	dense	TRIM22_GM12878	TRIM22_GM12878	Data format
	dense	TRIM22_HepG2	TRIM22_HepG2	Data format
	dense	TRIM22_MCF-7	TRIM22_MCF-7	Data format
	dense	TRIM24_K562	TRIM24_K562	Data format
	dense	TRIM28_HEK293	TRIM28_HEK293	Data format
	dense	TRIP13_K562	TRIP13_K562	Data format
	dense	U2AF1_HepG2	U2AF1_HepG2	Data format
	dense	U2AF1_K562	U2AF1_K562	Data format
	dense	U2AF2_HepG2	U2AF2_HepG2	Data format
	dense	U2AF2_K562	U2AF2_K562	Data format
	dense	UBTF_GM12878	UBTF_GM12878	Data format
	dense	UBTF_HeLa-S3	UBTF_HeLa-S3	Data format
	dense	UBTF_K562	UBTF_K562	Data format
	dense	USF1_H1-hESC	USF1_H1-hESC	Data format
	dense	USF1_HepG2	USF1_HepG2	Data format
	dense	USF1_SK-N-SH	USF1_SK-N-SH	Data format
	dense	USF2_A549	USF2_A549	Data format
	dense	USF2_H1-hESC	USF2_H1-hESC	Data format
	dense	USF2_IMR-90	USF2_IMR-90	Data format
	dense	USF2_K562	USF2_K562	Data format
	dense	USF2_SK-N-SH	USF2_SK-N-SH	Data format
	dense	WHSC1_K562	WHSC1_K562	Data format
	dense	XRCC3_K562	XRCC3_K562	Data format
	dense	XRCC5_HepG2	XRCC5_HepG2	Data format
	dense	XRCC5_K562	XRCC5_K562	Data format
	dense	YY1_A549	YY1_A549	Data format
	dense	YY1_H1-hESC	YY1_H1-hESC	Data format
	dense	YY1_HepG2	YY1_HepG2	Data format
	dense	YY1_liver	YY1_liver	Data format
	dense	YY1_NT2-D1	YY1_NT2-D1	Data format
	dense	YY1_SK-N-SH	YY1_SK-N-SH	Data format
	dense	ZBED1_GM12878	ZBED1_GM12878	Data format
	dense	ZBED1_K562	ZBED1_K562	Data format
	dense	ZBTB11_K562	ZBTB11_K562	Data format
	dense	ZBTB11_MCF-7	ZBTB11_MCF-7	Data format
	dense	ZBTB1_MCF-7	ZBTB1_MCF-7	Data format
	dense	ZBTB2_K562	ZBTB2_K562	Data format
	dense	ZBTB33_A549	ZBTB33_A549	Data format
	dense	ZBTB33_HepG2	ZBTB33_HepG2	Data format
	dense	ZBTB33_K562	ZBTB33_K562	Data format
	dense	ZBTB33_liver	ZBTB33_liver	Data format
	dense	ZBTB33_MCF-7	ZBTB33_MCF-7	Data format
	dense	ZBTB40_HepG2	ZBTB40_HepG2	Data format
	dense	ZBTB40_K562	ZBTB40_K562	Data format
	dense	ZBTB40_MCF-7	ZBTB40_MCF-7	Data format
	dense	ZBTB5_K562	ZBTB5_K562	Data format
	dense	ZBTB7A_HepG2	ZBTB7A_HepG2	Data format
	dense	ZBTB7A_K562	ZBTB7A_K562	Data format
	dense	ZBTB7B_MCF-7	ZBTB7B_MCF-7	Data format
	dense	ZBTB8A_K562	ZBTB8A_K562	Data format
	dense	ZEB1_bipolar_neuron	ZEB1_bipolar_neuron	Data format
	dense	ZEB2_K562	ZEB2_K562	Data format
	dense	ZFP91_K562	ZFP91_K562	Data format
	dense	ZFX_22Rv1	ZFX_22Rv1	Data format
	dense	ZFX_C4-2B	ZFX_C4-2B	Data format
	dense	ZFX_HCT116	ZFX_HCT116	Data format
	dense	ZFX_HEK293T	ZFX_HEK293T	Data format
	dense	ZFX_MCF-7	ZFX_MCF-7	Data format
	dense	ZHX1_HeLa-S3	ZHX1_HeLa-S3	Data format
	dense	ZHX1_K562	ZHX1_K562	Data format
	dense	ZHX2_HepG2	ZHX2_HepG2	Data format
	dense	ZHX2_MCF-7	ZHX2_MCF-7	Data format
	dense	ZKSCAN1_HepG2	ZKSCAN1_HepG2	Data format
	dense	ZKSCAN1_K562	ZKSCAN1_K562	Data format
	dense	ZKSCAN1_MCF-7	ZKSCAN1_MCF-7	Data format
	dense	ZMIZ1_K562	ZMIZ1_K562	Data format
	dense	ZMYM3_HepG2	ZMYM3_HepG2	Data format
	dense	ZMYM3_K562	ZMYM3_K562	Data format
	dense	ZNF143_H1-hESC	ZNF143_H1-hESC	Data format
	dense	ZNF143_K562	ZNF143_K562	Data format
	dense	ZNF184_K562	ZNF184_K562	Data format
	dense	ZNF207_GM12878	ZNF207_GM12878	Data format
	dense	ZNF207_HepG2	ZNF207_HepG2	Data format
	dense	ZNF207_MCF-7	ZNF207_MCF-7	Data format
	dense	ZNF217_GM12878	ZNF217_GM12878	Data format
	dense	ZNF217_MCF-7	ZNF217_MCF-7	Data format
	dense	ZNF24_HepG2	ZNF24_HepG2	Data format
	dense	ZNF24_K562	ZNF24_K562	Data format
	dense	ZNF24_MCF-7	ZNF24_MCF-7	Data format
	dense	ZNF263_HEK293	ZNF263_HEK293	Data format
	dense	ZNF274_GM08714	ZNF274_GM08714	Data format
	dense	ZNF274_K562	ZNF274_K562	Data format
	dense	ZNF274_NT2-D1	ZNF274_NT2-D1	Data format
	dense	ZNF280A_K562	ZNF280A_K562	Data format
	dense	ZNF282_HepG2	ZNF282_HepG2	Data format
	dense	ZNF282_K562	ZNF282_K562	Data format
	dense	ZNF316_K562	ZNF316_K562	Data format
	dense	ZNF318_K562	ZNF318_K562	Data format
	dense	ZNF384_HEK293T	ZNF384_HEK293T	Data format
	dense	ZNF384_HepG2	ZNF384_HepG2	Data format
	dense	ZNF384_K562	ZNF384_K562	Data format
	dense	ZNF407_K562	ZNF407_K562	Data format
	dense	ZNF444_MCF-7	ZNF444_MCF-7	Data format
	dense	ZNF507_MCF-7	ZNF507_MCF-7	Data format
	dense	ZNF512B_MCF-7	ZNF512B_MCF-7	Data format
	dense	ZNF574_MCF-7	ZNF574_MCF-7	Data format
	dense	ZNF579_MCF-7	ZNF579_MCF-7	Data format
	dense	ZNF592_GM12878	ZNF592_GM12878	Data format
	dense	ZNF592_K562	ZNF592_K562	Data format
	dense	ZNF592_MCF-7	ZNF592_MCF-7	Data format
	dense	ZNF639_K562	ZNF639_K562	Data format
	dense	ZNF687_GM12878	ZNF687_GM12878	Data format
	dense	ZNF687_MCF-7	ZNF687_MCF-7	Data format
	dense	ZNF830_K562	ZNF830_K562	Data format
	dense	ZNF8_MCF-7	ZNF8_MCF-7	Data format
	dense	ZSCAN29_GM12878	ZSCAN29_GM12878	Data format
	dense	ZSCAN29_K562	ZSCAN29_K562	Data format
	dense	ZZZ3_GM12878	ZZZ3_GM12878	Data format
	dense	ZZZ3_K562	ZZZ3_K562	Data format

Assembly: Human Dec. 2013 (GRCh38/hg38)

Description

This track shows regions of transcription factor binding derived from a large collection of ChIP-seq experiments performed by the ENCODE project between February 2011 and November 2018, spanning the first production phase of ENCODE ("ENCODE 2") through the second full production phase ("ENCODE 3").

Transcription factors (TFs) are proteins that bind to DNA and interact with RNA polymerases to regulate gene expression. Some TFs contain a DNA binding domain and can bind directly to specific short DNA sequences ('motifs'); others bind to DNA indirectly through interactions with TFs containing a DNA binding domain. High-throughput antibody capture and sequencing methods (e.g. chromatin immunoprecipitation followed by sequencing, or 'ChIP-seq') can be used to identify regions of TF binding genome-wide. These regions are commonly called ChIP-seq peaks.

ENCODE TF ChIP-seq data were processed using the ENCODE Transcription Factor ChIP-seq Processing Pipeline to generate peaks of TF binding. Peaks from 1264 experiments (1256 in hg38) representing 338 transcription factors (340 in hg38) in 130 cell types (129 in hg38) are combined here into clusters to produce a summary display showing occupancy regions for each factor. The underlying ChIP-seq peak data are available from the ENCODE 3 TF ChIP Peaks tracks ( hg19, hg38)

Display Conventions

A gray box encloses each peak cluster of transcription factor occupancy, with the darkness of the box being proportional to the maximum signal strength observed in any cell type contributing to the cluster. The HGNC gene name for the transcription factor is shown to the left of each cluster.

To the right of the cluster a configurable label can optionally display information about the cell types contributing to the cluster and how many cell types were assayed for the factor (count where detected / count where assayed). For brevity in the display, each cell type is abbreviated to a single letter. The darkness of the letter is proportional to the signal strength observed in the cell line. Abbreviations starting with capital letters designate ENCODE cell types initially identified for intensive study, while those starting with lowercase letters designate cell lines added later in the project.

Click on a peak cluster to see more information about the TF/cell assays contributing to the cluster and the cell line abbreviation table.

Methods

Peaks of transcription factor occupancy ("optimal peak set") from ENCODE ChIP-seq datasets were clustered using the UCSC hgBedsToBedExps tool. Scores were assigned to peaks by multiplying the input signal values by a normalization factor calculated as the ratio of the maximum score value (1000) to the signal value at one standard deviation from the mean, with values exceeding 1000 capped at 1000. This has the effect of distributing scores up to mean plus one 1 standard deviation across the score range, but assigning all above to the maximum score. The cluster score is the highest score for any peak contributing to the cluster.

Credits

Thanks to the ENCODE Consortium, the ENCODE ChIP-seq production laboratories, and the ENCODE Data Coordination Center for generating and processing the TF ChIP-seq datasets used here. The ENCODE accession numbers of the constituent datasets are available from the peak details page. Special thanks to Henry Pratt, Jill Moore, Michael Purcaro, and Zhiping Weng, PI, at the ENCODE Data Analysis Center (ZLab at UMass Medical Center) for providing the peak datasets, metadata, and guidance developing this track.

The integrative view presented here was developed by Jim Kent at UCSC.

References

ENCODE Project Consortium. A user's guide to the encyclopedia of DNA elements (ENCODE). PLoS Biol. 2011 Apr;9(4):e1001046. PMID: 21526222; PMCID: PMC3079585

ENCODE Project Consortium. An integrated encyclopedia of DNA elements in the human genome. Nature. 2012 Sep 6;489(7414):57-74. PMID: 22955616; PMCID: PMC3439153

Sloan CA, Chan ET, Davidson JM, Malladi VS, Strattan JS, Hitz BC, Gabdank I, Narayanan AK, Ho M, Lee BT et al. ENCODE data at the ENCODE portal. Nucleic Acids Res. 2016 Jan 4;44(D1):D726-32. PMID: 26527727; PMC: PMC4702836

Gerstein MB, Kundaje A, Hariharan M, Landt SG, Yan KK, Cheng C, Mu XJ, Khurana E, Rozowsky J, Alexander R et al. Architecture of the human regulatory network derived from ENCODE data. Nature. 2012 Sep 6;489(7414):91-100. PMID: 22955619

Wang J, Zhuang J, Iyer S, Lin X, Whitfield TW, Greven MC, Pierce BG, Dong X, Kundaje A, Cheng Y et al. Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors. Genome Res. 2012 Sep;22(9):1798-812. PMID: 22955990; PMC: PMC3431495

Wang J, Zhuang J, Iyer S, Lin XY, Greven MC, Kim BH, Moore J, Pierce BG, Dong X, Virgil D et al. Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium. Nucleic Acids Res. 2013 Jan;41(Database issue):D171-6. PMID: 23203885; PMC: PMC3531197

Data Use Policy

Users may freely download, analyze and publish results based on any ENCODE data without restrictions. Researchers using unpublished ENCODE data are encouraged to contact the data producers to discuss possible coordinated publications; however, this is optional.

Users of ENCODE datasets are requested to cite the ENCODE Consortium and ENCODE production laboratory(s) that generated the datasets used, as described in Citing ENCODE.

Additional References

Data taken directly from http://hgdownload.soe.ucsc.edu/goldenPath/hg38/encRegTfbsClustered/ Complete track description here

Email:jferna10@ucsc.edu or max@soe.ucsc.edu