Description
This track shows depth sequencing coverage for the four HapMap populations in
the ten ENCODE regions that have been resequenced for variation. The data for
each population is shown in a separate subtrack:
- HapMap Allele Frequencies (CEU): Utah residents with ancestry from northern
and western Europe
- HapMap Allele Frequencies (CHB): Han Chinese in Beijing, China
- HapMap Allele Frequencies (JPT): Japanese in Tokyo, Japan
- HapMap Allele Frequencies (YRI): Yoruba in Ibadan, Nigeria
The ENCODE regions targeted in this annotation include:
- ENr112 (chr2)
- ENr131 (chr2)
- ENr113 (chr4)
- ENm010 (chr7)
- ENm013 (chr7)
- ENm014 (chr7)
- ENr321 (chr8)
- ENr232 (chr9)
- ENr123 (chr12)
- ENr213 (chr18)
Display Conventions and Configuration
The subtracks within this annotation
may be configured in a variety of ways to highlight different aspects of the
displayed data. The graphical configuration options are shown at the top of
the track description page, followed by a list of subtracks. To display only
selected subtracks, uncheck the boxes next to the tracks you wish to hide.
For more information about the graphical configuration options, click the
Graph
configuration help link.
Methods
Each data value represents the number of sequencing traces that covered the
nucleotide.
See the International HapMap
Project website for information about how these data were collected and
analyzed.
Credits
These data were obtained from HapMap public release 16c.1. Thanks to the
International HapMap Project for making this information available.
|