UCSC Genome Browser on Human (GRCh37/hg19)
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chr4:84,377,519-84,392,518 15,000 bp.
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-   Custom Tracks
all_somatic_variants
BCAC OncoArray FM bcac_cimba_secondary_signals
BCAC OncoArray FM CANDIDATE SNPs - Coloured by Signal
BCAC OncoArray FM cimba_secondary_signals
BCAC OncoArray FM weaker_secondary_signals
Breast DNase/FAIRE-seq Density (ENCODE, Roadmap, GEO)
Breast Histone ChIP-seq Density (ENCODE, Roadmap, GEO)
Breast TF Density (ENCODE, GEO)
Breast_vHMEC_ChromHMM-25state_ENHANCERS
BRST CHROMATINACCESS signals overlapping BCAC_FM.candidates.funcAnnot.input variants
enhancers_for_SM_analysis
Hnisz BRST enhancers overlapping BCAC_FM.candidates.funcAnnot.input SNP
PCHi-C_B80-T5_lib1
PCHi-C_B80-T5_lib2
PCHi-C_MDA-MB-231_lib1
PCHi-C_MDA-MB-231_lib2
PCHi-C_T47D_lib1
PCHi-C_T47D_lib2
PCHiC probes
Rao HMEC TADs
RNAcapseq_lncRNAs_FPKMabove0.49_forward
RNAcapseq_lncRNAs_FPKMabove0.49_reverse
rnacapseqDDR_multiExonicLncRNAsFPKM0.5_forward
rnacapseqDDR_multiExonicLncRNAsFPKM0.5_reverse
rnacaptureseqSortedCells_mencRNAsFPKM0.5_forward
rnacaptureseqSortedCells_mencRNAsFPKM0.5_reverse
SCHi-C_B80_T5_lib1
SCHi-C_B80_T5_lib2
SCHi-C_MCF10A_lib1
SCHi-C_MCF10A_lib2
SCHi-C_T47D_lib1
SCHiC probes
somatic_mutations
T47D TADs
BCAC OncoArray FM candidate_SNPs
Breast_vHMEC_ChromHMM-25state_PROMOTERS
BRST HISTONE signals overlapping BCAC_FM.candidates.funcAnnot.input variants
IM-PET BRST enhancers overlapping BCAC_FM.candidates.funcAnnot.input SNP
Breast_vHMEC_ChromHMM-25state_TRANSCRIBED
BRST TF signals overlapping BCAC_FM.candidates.funcAnnot.input variants
PreSTIGE BRST enhancers overlapping BCAC_FM.candidates.funcAnnot.input SNP
Breast_Myoepithelial_ChromHMM-25state_ENHANCERS
ChIA-PET BRST interactions overlapping BCAC_FM.candidates.funcAnnot.input SNP
BCAC OncoArray Fine-mapping regions
Breast_Myoepithelial_ChromHMM-25state_PROMOTERS
FANTOM5 BRST interactions overlapping BCAC_FM.candidates.funcAnnot.input SNP
Breast_Myoepithelial_ChromHMM-25state_TRANSCRIBED
isHi-C BRST interactions overlapping BCAC_FM.candidates.funcAnnot.input SNP
BCAC_FM.candidates.funcAnnot.input Variants
Oncoarray SNPs
-   Roadmap Epigenomics Data Complete Collection at Wash U VizHub
Broad Histone
UCSD Histone
UCSF-UBC-USC Histone
DNase
Footprinting
RNA
DNA Methylation
By Assay
By Sample
Assay Summary
Sample Summary
Methylation Summary
Roadmap Uniformly Signal
chromHMM
+   Mapping and Sequencing
-   Genes and Gene Predictions
UCSC Genes
NCBI RefSeq
CCDS
CRISPR Targets
Ensembl Genes
EvoFold
Exoniphy
updated GENCODE Versions
H-Inv 7.0
HGNC
IKMC Genes Mapped
lincRNAs
LRG Transcripts
MGC Genes
Old UCSC Genes
ORFeome Clones
Other RefSeq
Pfam in UCSC Gene
Prediction Archive
Retroposed Genes
sno/miRNA
TransMap V5
tRNA Genes
UCSC Alt Events
UniProt
Vega Genes
Yale Pseudo60
-   Phenotype and Literature
Publications
COVID Rare Harmful Var
CADD
ClinGen
ClinGen CNVs
ClinVar Variants
Constraint scores
Coriell CNVs
COSMIC Regions
DECIPHER CNVs
DECIPHER SNVs
Development Delay
new Dosage Sensitivity
GAD View
GenCC
Gene Interactions
GeneReviews
GWAS Catalog
Haploinsufficiency
HGMD public
Lens Patents
LOVD Variants
MGI Mouse QTL
OMIM Alleles
OMIM Cyto Loci
OMIM Genes
Orphanet
PanelApp
Polygenic Risk Scores
new Prediction Scores
REVEL Scores
RGD Human QTL
RGD Rat QTL
SNPedia
UniProt Variants
Variants in Papers
Web Sequences
-   mRNA and EST
CGAP SAGE
Gene Bounds
H-Inv
Human ESTs
Human mRNAs
Human RNA Editing
Other ESTs
Other mRNAs
Poly(A)
PolyA-Seq
SIB Alt-Splicing
Spliced ESTs
UniGene
-   Expression
GTEx Gene V8
Allen Brain
Burge RNA-seq
CSHL Small RNA-seq
ENC Exon Array
ENC ProtGeno
ENC RNA-seq
EPDnew Promoters
Affy Archive
GIS RNA PET
GNF Atlas 2
GTEx Gene
GTEx Transcript
GWIPS-viz Riboseq
Illumina WG-6
PeptideAtlas
qPCR Primers
RIKEN CAGE Loc
Sestan Brain
-   Regulation
ENCODE Regulation
CD34 DnaseI
CpG Islands
ENC Chromatin
ENC DNA Methyl
ENC DNase/FAIRE
ENC Histone
ENC RNA Binding
ENC TF Binding
new FANTOM5
FSU Repli-chip
GeneHancer
Genome Segments
GTEx Combined eQTL
GTEx Tissue eQTL
updated JASPAR Transcription Factors
NKI Nuc Lamina
ORegAnno
Rao 2014 Hi-C
ReMap ChIP-seq
Stanf Nucleosome
SUNY SwitchGear
SwitchGear TSS
TFBS Conserved
TS miRNA Targets
UCSF Brain Methyl
UMMS Brain Hist
UW Repli-seq
VISTA Enhancers
-   Comparative Genomics
Conservation
Cons 46-Way
Cons Indels MmCf
Evo Cpg
GERP
phastBias gBGC
Primate Chain/Net
Placental Chain/Net
Vertebrate Chain/Net
CHM13 alignments
+   Neandertal Assembly and Analysis
+   Denisova Assembly and Analysis
-   Variation
dbSNP 155
COVID GWAS v4
COVID GWAS v3
1000G Archive
Array Probesets
dbSNP Archive
dbVar Common Struct Var
DGV Struct Var
EVS Variants
ExAC
Genome In a Bottle
Genome Variants
GIS DNA PET
gnomAD
HAIB Genotype
HapMap SNPs
HGDP Allele Freq
Platinum Genomes
-   Repeats
RepeatMasker
Interrupted Rpts
Microsatellite
NumtS Sequence
Segmental Dups
Self Chain
Simple Repeats
WM + SDust
Invisible link