UCSC Genome Browser on D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1 MT/dm6) Assembly
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chr2L:10,915,365-11,135,492 220,128 bp.
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-   Custom Tracks
18h_ATAC_dicer1_150bp_q0.1
18h_vs_48h_closing
18h_vs_48h_opening
48h_FACS_dicer1
48h_vs_82h_closing
48h_vs_82h_opening
82h_ATAC_dicer1_150bp_q0.1
82h_ATAC_FDR0.1_150bp_down
82h_ATAC_FDR0.1_150bp_up
82h_ATAC_q0.1PE_FDR0.1_up
82h_dicer1_PEq0.1
82h_FACS_dicer1_Dup
82h_FACS_dicer1_NoDup
82h_rerun_dicer1_PEq0.1_peaks
82h_vs_larva_q0.1PE_FDR0.1_up
82hPE_dicer1_q0.1
all_tads
DC216_82h_dicer1.mitoMinus.nodup
GFP1_bowtie2_qual20
intergenic
larva_FACS_dicer1
larva_FACS_dicer1_NoDup
larva_vs_82h_opening
larval_ATAC_dicer1_150bp_q0.1
larval_vs_18h_closing
larval_vs_18h_opening
larval_vs_82h_closing
tad_active
tad_borders
tad_inactive
tad_PcG
18h_ATAC_dicer2_150bp_q0.1
48h_FACS_dicer2
82h_ATAC_dicer2_150bp_q0.1
82h_ATAC_q0.1PE_FDR0.1_down
82h_dicer2_PEq0.1
82h_FACS_dicer2_Dup
82h_FACS_dicer2_NoDup
82h_rerun_dicer2_PEq0.1_peaks
82h_vs_larva_q0.1PE_FDR0.1_down
82hPE_dicer2_q0.1
DC216_82h_dicer1.mitoMinus.nodup_mappingQC_NA
GFP2_bowtie2_qual20
larval_ATAC_dicer2_150bp_q0.1
18h_ATAC_dicer3_150bp_q0.1
48h_FACS_dicer3
82h_ATAC_dicer3_150bp_q0.1
82h_dicer3_PEq0.1
82h_FACS_dicer3_Dup
82h_FACS_dicer3_NoDup
82h_rerun_dicer3_PEq0.1_peaks
82hPE_dicer3_q0.1
GFP3_bowtie2_qual20
larval_ATAC_dicer3_150bp_q0.1
18h_ATAC_UUU1_150bp_q0.1
48h_FACS_UUU1
82h_ATAC_UUU1_150bp_q0.1
82h_FACS_UUU1_Dup
82h_FACS_UUU1_NoDup
82h_rerun_UUU1_PEq0.1_peaks
82h_UUU1_PEq0.1
82hPE_UUU1_q0.1
larval_ATAC_UUU1_150bp_q0.1
Shep1_bowtie2_qual20
18h_ATAC_UUU2_150bp_q0.1
48h_FACS_UUU2
82h_ATAC_UUU2_150bp_q0.1
82h_FACS_UUU2_Dup
82h_FACS_UUU2_NoDup
82h_rerun_UUU2_PEq0.1_peaks
82h_UUU2_PEq0.1
82hPE_UUU2_q0.1
larval_ATAC_UUU2_150bp_q0.1
Shep2_bowtie2_qual20
18h_ATAC_UUU3_150bp_q0.1
48h_FACS_UUU3
82h_ATAC_UUU3_150bp_q0.1
82h_FACS_UUU3_Dup
82h_FACS_UUU3_NoDup
82h_rerun_UUU3_PEq0.1_peaks
82h_UUU3_PEq0.1
82hPE_UUU3_q0.1
larval_ATAC_UUU3_150bp_q0.1
Shep3_bowtie2_qual20
48h_ATAC_dicer1_150bp_q0.1
48h_ATAC_dicer2_150bp_q0.1
48h_ATAC_dicer3_150bp_q0.1
48h_ATAC_UUU1_150bp_q0.1
48h_ATAC_UUU2_150bp_q0.1
48h_ATAC_UUU3_150bp_q0.1
-   insulators track hub
chipseq insulators track hub
mapping insulators track hub
-   modENCODE data
modENCODE
-   Track Collections
APF82h_FACS_RNAseq_UUU_NoDup
FourC_dsGFP
FourC_dsShep
APF82h_ATAC_dicer_100
APF82h_ATAC_UUU_100
APF82h_ATAC_dicer_150bp
APF82h_ATAC_UUU_150bp
larval_dicer_ATAC_150
larval_UUU_ATAC_150
APF18h_dicer_ATAC_150bp
APF18h_UUU_ATAC_150bp
APF48h_dicer_ATAC_150bp
APF48h_UUU_ATAC_150bp
-   brain-chipseq-dm6 track hub
chipseq brain-chipseq-dm6 track hub
mapping brain-chipseq-dm6 track hub
-   dahong-shep-brain-rnaseq track hub
mapping dahong-shep-brain-rnaseq track hub
rnaseq dahong-shep-brain-rnaseq track hub
-   Mapping and Sequencing
Base Position
Chromosome Band
Assembly
Gap
GC Percent
INSDC
RefSeq Acc
Restr Enzymes
Short Match
Blat Sequence
-   Genes and Gene Predictions
NCBI RefSeq
Other RefSeq
AUGUSTUS
CRISPR...
updated Ensembl Genes
Genscan Genes
Pfam in RefSeq
UniProt
-   mRNA and EST
D. melanogaster mRNAs
Spliced ESTs
D. melanogaster ESTs
Other mRNAs
-   Expression and Regulation
CpG Islands...
ORegAnno
-   Comparative Genomics
Conservation
Cons 124 Insects
Insects Chain/Net
-   Variation and Repeats
Interrupted Rpts
Microsatellite
Simple Repeats
UniProt Variants
WM + SDust
RepeatMasker