Human Gene MNT (ENST00000174618.5) from GENCODE V44
  Description: Homo sapiens MAX network transcriptional repressor (MNT), mRNA. (from RefSeq NM_020310)
RefSeq Summary (NM_020310): The Myc/Max/Mad network comprises a group of transcription factors that co-interact to regulate gene-specific transcriptional activation or repression. This gene encodes a protein member of the Myc/Max/Mad network. This protein has a basic-Helix-Loop-Helix-zipper domain (bHLHzip) with which it binds the canonical DNA sequence CANNTG, known as the E box, following heterodimerization with Max proteins. This protein is likely a transcriptional repressor and an antagonist of Myc-dependent transcriptional activation and cell growth. This protein represses transcription by binding to DNA binding proteins at its N-terminal Sin3-interaction domain. [provided by RefSeq, Jul 2008].
Gencode Transcript: ENST00000174618.5
Gencode Gene: ENSG00000070444.15
Transcript (Including UTRs)
   Position: hg38 chr17:2,384,073-2,401,060 Size: 16,988 Total Exon Count: 6 Strand: -
Coding Region
   Position: hg38 chr17:2,386,901-2,400,712 Size: 13,812 Coding Exon Count: 6 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr17:2,384,073-2,401,060)mRNA (may differ from genome)Protein (582 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGencodeGeneCards
HGNCHPRDLynxMalacardsMGIneXtProt
OMIMPubMedUniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: MNT_HUMAN
DESCRIPTION: RecName: Full=Max-binding protein MNT; AltName: Full=Class D basic helix-loop-helix protein 3; Short=bHLHd3; AltName: Full=Myc antagonist MNT; AltName: Full=Protein ROX;
FUNCTION: Binds DNA as a heterodimer with MAX and represses transcription. Binds to the canonical E box sequence 5'-CACGTG-3' and, with higher affinity, to 5'-CACGCG-3'.
SUBUNIT: Efficient DNA binding requires dimerization with another bHLH protein. Binds DNA as a homodimer or a heterodimer with MAX.
SUBCELLULAR LOCATION: Nucleus.
SIMILARITY: Contains 1 bHLH (basic helix-loop-helix) domain.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MNT
Diseases sorted by gene-association score: tetanus neonatorum (2), retinitis pigmentosa, y-linked (1), wolfram syndrome 2 (1)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 13.03 RPKM in Testis
Total median expression: 371.37 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -153.00348-0.440 Picture PostScript Text
3' UTR -1180.202828-0.417 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011598 - HLH_dom

Pfam Domains:
PF00010 - Helix-loop-helix DNA-binding domain

ModBase Predicted Comparative 3D Structure on Q99583
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserGenome BrowserGenome BrowserNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGDEnsemblEnsembl  
Protein SequenceProtein SequenceProtein SequenceProtein Sequence  
AlignmentAlignmentAlignmentAlignment  

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003700 transcription factor activity, sequence-specific DNA binding
GO:0003713 transcription coactivator activity
GO:0003714 transcription corepressor activity
GO:0046983 protein dimerization activity

Biological Process:
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006366 transcription from RNA polymerase II promoter
GO:0007275 multicellular organism development
GO:0007569 cell aging
GO:0008285 negative regulation of cell proliferation
GO:0051726 regulation of cell cycle
GO:2001234 negative regulation of apoptotic signaling pathway

Cellular Component:
GO:0005634 nucleus
GO:0005654 nucleoplasm


-  Descriptions from all associated GenBank mRNAs
  X96401 - H.sapiens mRNA for ROX protein.
JD502454 - Sequence 483478 from Patent EP1572962.
BC033186 - Homo sapiens MAX binding protein, mRNA (cDNA clone IMAGE:4589300).
BC117563 - Homo sapiens MAX binding protein, mRNA (cDNA clone MGC:131693 IMAGE:3904263), complete cds.
JD082188 - Sequence 63212 from Patent EP1572962.
JD358279 - Sequence 339303 from Patent EP1572962.
X69879 - H.sapiens mRNA for D17S379-E.
JD239041 - Sequence 220065 from Patent EP1572962.
JD563120 - Sequence 544144 from Patent EP1572962.
JD382643 - Sequence 363667 from Patent EP1572962.
JD054607 - Sequence 35631 from Patent EP1572962.
JD127114 - Sequence 108138 from Patent EP1572962.
JD416595 - Sequence 397619 from Patent EP1572962.
JD398028 - Sequence 379052 from Patent EP1572962.
JD470777 - Sequence 451801 from Patent EP1572962.
JD498221 - Sequence 479245 from Patent EP1572962.
JD282960 - Sequence 263984 from Patent EP1572962.
JD104811 - Sequence 85835 from Patent EP1572962.
JD475360 - Sequence 456384 from Patent EP1572962.
JD483444 - Sequence 464468 from Patent EP1572962.
JD495511 - Sequence 476535 from Patent EP1572962.
JD395688 - Sequence 376712 from Patent EP1572962.
JD126790 - Sequence 107814 from Patent EP1572962.
JD151787 - Sequence 132811 from Patent EP1572962.
JD470895 - Sequence 451919 from Patent EP1572962.
JD444276 - Sequence 425300 from Patent EP1572962.
JD036758 - Sequence 17782 from Patent EP1572962.
JD438457 - Sequence 419481 from Patent EP1572962.
JD397438 - Sequence 378462 from Patent EP1572962.
JD437770 - Sequence 418794 from Patent EP1572962.
JD256249 - Sequence 237273 from Patent EP1572962.
JD304940 - Sequence 285964 from Patent EP1572962.
JD340430 - Sequence 321454 from Patent EP1572962.
JD167544 - Sequence 148568 from Patent EP1572962.
JD277814 - Sequence 258838 from Patent EP1572962.
JD527006 - Sequence 508030 from Patent EP1572962.
JD424607 - Sequence 405631 from Patent EP1572962.
JD167080 - Sequence 148104 from Patent EP1572962.
JD341286 - Sequence 322310 from Patent EP1572962.
JD241688 - Sequence 222712 from Patent EP1572962.
JD499313 - Sequence 480337 from Patent EP1572962.
JD233523 - Sequence 214547 from Patent EP1572962.
JD532561 - Sequence 513585 from Patent EP1572962.
JD339050 - Sequence 320074 from Patent EP1572962.
JD234762 - Sequence 215786 from Patent EP1572962.
JD399591 - Sequence 380615 from Patent EP1572962.
JD266893 - Sequence 247917 from Patent EP1572962.
JD424455 - Sequence 405479 from Patent EP1572962.
JD444114 - Sequence 425138 from Patent EP1572962.
JD065228 - Sequence 46252 from Patent EP1572962.
JD562333 - Sequence 543357 from Patent EP1572962.
JD544974 - Sequence 525998 from Patent EP1572962.
JD448697 - Sequence 429721 from Patent EP1572962.
JD484894 - Sequence 465918 from Patent EP1572962.
JD226400 - Sequence 207424 from Patent EP1572962.
JD278071 - Sequence 259095 from Patent EP1572962.
JD392634 - Sequence 373658 from Patent EP1572962.
JD396507 - Sequence 377531 from Patent EP1572962.
JD393995 - Sequence 375019 from Patent EP1572962.
JD163668 - Sequence 144692 from Patent EP1572962.
JD107867 - Sequence 88891 from Patent EP1572962.
JD373315 - Sequence 354339 from Patent EP1572962.
JD514985 - Sequence 496009 from Patent EP1572962.
JD321573 - Sequence 302597 from Patent EP1572962.
JD334529 - Sequence 315553 from Patent EP1572962.
JD290252 - Sequence 271276 from Patent EP1572962.
AK291596 - Homo sapiens cDNA FLJ75090 complete cds, highly similar to Homo sapiens MAX binding protein (MNT), mRNA.
JD217277 - Sequence 198301 from Patent EP1572962.
JD214248 - Sequence 195272 from Patent EP1572962.
JD132065 - Sequence 113089 from Patent EP1572962.
JD115841 - Sequence 96865 from Patent EP1572962.
JD123452 - Sequence 104476 from Patent EP1572962.
JD210294 - Sequence 191318 from Patent EP1572962.
JD248296 - Sequence 229320 from Patent EP1572962.
JD492477 - Sequence 473501 from Patent EP1572962.
AB463857 - Synthetic construct DNA, clone: pF1KB8388, Homo sapiens MNT gene for MAX binding protein, without stop codon, in Flexi system.
JD270899 - Sequence 251923 from Patent EP1572962.
JD519445 - Sequence 500469 from Patent EP1572962.
JD473208 - Sequence 454232 from Patent EP1572962.
JD423201 - Sequence 404225 from Patent EP1572962.
JD113764 - Sequence 94788 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A8K6D1, BHLHD3, D3DTI7, ENST00000174618.1, ENST00000174618.2, ENST00000174618.3, ENST00000174618.4, MNT_HUMAN, NM_020310, Q1ED38, Q99583, ROX, uc002fur.1, uc002fur.2, uc002fur.3, uc002fur.4, uc002fur.5
UCSC ID: ENST00000174618.5
RefSeq Accession: NM_020310
Protein: Q99583 (aka MNT_HUMAN)
CCDS: CCDS11018.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.