Human Gene IGHV1OR15-9 (ENST00000338912.5) from GENCODE V44
  Description: immunoglobulin heavy variable 1/OR15-9 (non-functional) (from HGNC IGHV1OR15-9)
Gencode Transcript: ENST00000338912.5
Gencode Gene: ENSG00000188403.7
Transcript (Including UTRs)
   Position: hg38 chr15:19,964,666-19,965,101 Size: 436 Total Exon Count: 2 Strand: -
Coding Region
   Position: hg38 chr15:19,964,666-19,965,101 Size: 436 Coding Exon Count: 2 

Page IndexSequence and LinksPrimersRNA-Seq ExpressionMicroarray ExpressionOther Species
Other NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr15:19,964,666-19,965,101)mRNA (may differ from genome)Protein (117 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaAlphaFoldEnsembl
ExonPrimerGencodeGeneCardsHGNCLynxMGI
PubMedUniProtKB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.00 RPKM in Adipose - Subcutaneous
Total median expression: 0.00 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Other Names for This Gene
  Alternate Gene Symbols: A0A0B4J2B8, ENST00000338912.1, ENST00000338912.2, ENST00000338912.3, ENST00000338912.4, uc059gon.1
UCSC ID: ENST00000338912.5

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.