Human Gene TRBJ1-3 (ENST00000633780.1) from GENCODE V44
  Description: T cell receptor beta joining 1-3 (from HGNC TRBJ1-3)
Gencode Transcript: ENST00000633780.1
Gencode Gene: ENSG00000282133.1
Transcript (Including UTRs)
   Position: hg38 chr7:142,787,630-142,787,679 Size: 50 Total Exon Count: 1 Strand: +
Coding Region
   Position: hg38 chr7:142,787,630-142,787,679 Size: 50 Coding Exon Count: 1 

Page IndexSequence and LinksPrimersOther SpeciesmRNA DescriptionsOther Names
Methods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:142,787,630-142,787,679)mRNA (may differ from genome)Protein (15 aa)
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-  Primer design for this transcript
 

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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  EF592006 - Homo sapiens clone 8746-15 T cell receptor mRNA, partial cds.
MG789276 - Homo sapiens isolate Sample1_Cell123_12D2_CDR3b T-cell receptor beta chain mRNA, partial sequence.
MG790619 - Homo sapiens isolate Sample3_Cell152_2F3_CDR3b T-cell receptor beta chain mRNA, partial sequence.
HM236724 - Homo sapiens isolate x025-18_e10_MS250_MBP TCR (CDR3) mRNA, partial cds.
HM236684 - Homo sapiens isolate x025-5_c9_MS210_PLP TCR (CDR3) mRNA, partial cds.
HM236723 - Homo sapiens isolate x025-18_b4_MS250_MBP TCR (CDR3) mRNA, partial cds.
KX076460 - Homo sapiens isolate SG_Subject3 clone 687-3 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
S80450 - V beta 23=CD8 T-cell receptor beta chain variable region {clone 9} [human, T-cells, mRNA Partial, 81 nt].
MG192950 - Homo sapiens isolate HD19_NN15_E8 T cell receptor beta mRNA, partial cds.
MG192983 - Homo sapiens isolate HD19_NN14_E1 T cell receptor beta mRNA, partial cds.
KX075588 - Homo sapiens isolate PB_Subject8 clone 1367-8 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AY534307 - Homo sapiens clone BV9-BJ1.3 T-cell receptor beta chain mRNA, partial cds.
KX076378 - Homo sapiens isolate SG_Subject5 clone 605-5 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG193014 - Homo sapiens isolate HD19_NN15_C9 T cell receptor beta mRNA, partial cds.
KX077146 - Homo sapiens isolate SG_Subject8 clone 1373-8 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AB977728 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: N(2)-TRB54.
AF430675 - Homo sapiens T cell receptor beta variable region, Vbeta 5S1A1T-APLTGDSGNTIYF-Jbeta 1.3 mRNA, partial cds.
MG791169 - Homo sapiens isolate AA_Cell73_3G3_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KM004550 - Homo sapiens clone 525 T cell receptor beta mRNA, partial cds.
KM004623 - Homo sapiens clone 598 T cell receptor beta mRNA, partial cds.
AB749827 - Homo sapiens mRNA for T-cell receptor beta chain, partial cds, clone: E_21_beta.
KX074510 - Homo sapiens isolate PB_Subject7 clone 289-7 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG789153 - Homo sapiens isolate Sample1_Cell71_11G3_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KX075549 - Homo sapiens isolate PB_Subject10 clone 1328-10 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG193117 - Homo sapiens isolate HD20_NN16_H6 T cell receptor beta mRNA, partial cds.
MG790034 - Homo sapiens isolate Sample2_Cell137_2D10_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KX076045 - Homo sapiens isolate SG_Subject7 clone 272-7 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076074 - Homo sapiens isolate SG_Subject7 clone 301-7 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AB977503 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: N(1)-TRB24.
KX076658 - Homo sapiens isolate SG_Subject6 clone 885-6 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076816 - Homo sapiens isolate SG_Subject9 clone 1043-9 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG789395 - Homo sapiens isolate Sample1_Cell177_13A6_CDR3b T-cell receptor beta chain mRNA, partial sequence.
JN695569 - Homo sapiens isolate NE2 T cell receptor beta chain (TRB) mRNA, partial cds.
KX075960 - Homo sapiens isolate SG_Subject2 clone 187-2 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AB977535 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: N(1)-TRB108.
MG789845 - Homo sapiens isolate Sample2_Cell49_1E1_CDR3b T-cell receptor beta chain mRNA, partial sequence.
MG790202 - Homo sapiens isolate Sample2_Cell212_4C11_CDR3b T-cell receptor beta chain mRNA, partial sequence.
EF567070 - Homo sapiens clone M15 T-cell receptor beta chain (TRBV1) mRNA, partial cds.
KX076699 - Homo sapiens isolate SG_Subject9 clone 926-9 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG193076 - Homo sapiens isolate HD20_NN16_A2 T cell receptor beta mRNA, partial cds.
MG791050 - Homo sapiens isolate AA_Cell21_3B9_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KX075904 - Homo sapiens isolate SG_Subject2 clone 131-2 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG193013 - Homo sapiens isolate HD19_NN14_E7 T cell receptor beta mRNA, partial cds.
KM004184 - Homo sapiens clone 159 T cell receptor beta mRNA, partial cds.
KX074324 - Homo sapiens isolate PB_Subject1 clone 103-1 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX075030 - Homo sapiens isolate PB_Subject3 clone 809-3 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX075657 - Homo sapiens isolate PB_Subject8 clone 1436-8 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG790572 - Homo sapiens isolate Sample3_Cell131_2D4_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KX074899 - Homo sapiens isolate PB_Subject5 clone 678-5 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG790882 - Homo sapiens isolate Sample3_Cell266_7E10_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KX074892 - Homo sapiens isolate PB_Subject5 clone 671-5 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX074438 - Homo sapiens isolate PB_Subject2 clone 217-2 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX074655 - Homo sapiens isolate PB_Subject4 clone 434-4 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KM004561 - Homo sapiens clone 536 T cell receptor beta mRNA, partial cds.
KX076404 - Homo sapiens isolate SG_Subject5 clone 631-5 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AY006274 - Homo sapiens clone ga0569 T cell receptor beta chain mRNA, partial cds.
U85050 - Human T cell receptor beta chain mRNA, partial cds.
AB305843 - Homo sapiens mRNA for T cell receptor beta variable 5, partial cds, clone: SEB 113.
AB305882 - Homo sapiens mRNA for T cell receptor beta variable 5, partial cds, clone: SEB 204.
AF430668 - Homo sapiens T cell receptor beta variable region, Vbeta 5S2-SSPTGRSGNTIYF-Jbeta 1.3 mRNA, partial cds.
KX076724 - Homo sapiens isolate SG_Subject9 clone 951-9 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
U85052 - Human T cell receptor beta chain mRNA, partial cds.
KX075682 - Homo sapiens isolate PB_Subject8 clone 1461-8 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
M14261 - Human T-cell receptor rearranged beta-chain V-region (V-D-J) mRNA, clone 22.
KX076897 - Homo sapiens isolate SG_Subject10 clone 1124-10 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AF009786 - Homo sapiens T cell receptor beta chain (TCRB) mRNA, partial cds.
KX075371 - Homo sapiens isolate PB_Subject9 clone 1150-9 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX075756 - Homo sapiens isolate PB_Subject8 clone 1535-8 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AB977723 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: N(2)-TRB35-2.
MG790587 - Homo sapiens isolate Sample3_Cell138_2D11_CDR3b T-cell receptor beta chain mRNA, partial sequence.
HM467862 - Homo sapiens clone x023-5_c7_H504_PLP T cell receptor beta chain mRNA, partial cds.
S80449 - V beta 23=CD8 T-cell receptor beta chain variable region {clone 10} [human, T-cells, mRNA Partial, 72 nt].
X04935 - Human mRNA for T-cell receptor beta-chain (clone HBVP54) (Family Member: V beta 12.2, D beta 1.1, J beta 1.3, C beta 1).
AF117140 - Homo sapiens clone MS9-C.26 T-cell receptor V beta chain 12 mRNA, partial cds.
AB977756 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: N(2)-TRB176.
AB306234 - Homo sapiens mRNA for T cell receptor beta variable 12, partial cds, clone: un 213.
KX076216 - Homo sapiens isolate SG_Subject4 clone 443-4 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076177 - Homo sapiens isolate SG_Subject7 clone 404-7 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX075766 - Homo sapiens isolate PB_Subject8 clone 1545-8 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AB978154 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: Donor4-TRB111.
MG193081 - Homo sapiens isolate HD20_NN18_H12 T cell receptor beta mRNA, partial cds.
MG193110 - Homo sapiens isolate HD20_NN17_H5 T cell receptor beta mRNA, partial cds.
MG789056 - Homo sapiens isolate Sample1_Cell28_11C6_CDR3b T-cell receptor beta chain mRNA, partial sequence.
MG789817 - Homo sapiens isolate Sample2_Cell36_1C12_CDR3b T-cell receptor beta chain mRNA, partial sequence.
MG791158 - Homo sapiens isolate AA_Cell68_3F9_CDR3b T-cell receptor beta chain mRNA, partial sequence.
MH918760 - Homo sapiens clone 7A10 T cell receptor beta chain (TRB) mRNA, partial cds.
MH918774 - Homo sapiens clone 18A2 T cell receptor beta chain (TRB) mRNA, partial cds.
KM004556 - Homo sapiens clone 531 T cell receptor beta mRNA, partial cds.
AF043804 - Homo sapiens patient CS-2 clone 8 T cell receptor beta chain CDR3 (TCRB) mRNA, partial cds.
AF043805 - Homo sapiens patient CS-2 clone 9 T cell receptor beta chain CDR3 (TCRB) mRNA, partial cds.
AF043842 - Homo sapiens patient CS-3 clone 12 T cell receptor beta chain CDR3 (TCRB) mRNA, partial cds.
KX076288 - Homo sapiens isolate SG_Subject4 clone 515-4 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076507 - Homo sapiens isolate SG_Subject3 clone 734-3 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
MG192980 - Homo sapiens isolate HD19_NN15_B12 T cell receptor beta mRNA, partial cds.
EF592005 - Homo sapiens clone 8746-4 T cell receptor mRNA, partial cds.
MK088544 - Homo sapiens clone F1021 T cell receptor beta chain (TRB) mRNA, TRB-V12-3*01 allele, partial cds.
LR800353 - Homo Sapiens mRNA for T-cell receptor beta chain (TRB gene), clone PR3 Donor D TRBV11-2*01.
LR800352 - Homo Sapiens mRNA for T-cell receptor beta chain (TRB gene), clone PR3 Donor D TRBV11-2*01.
LR800351 - Homo Sapiens mRNA for T-cell receptor beta chain (TRB gene), clone PR3 Donor D TRBV11-2*01.
MG192993 - Homo sapiens isolate HD19_NN14_E9 T cell receptor beta mRNA, partial cds.
MG789126 - Homo sapiens isolate Sample1_Cell58_11F1_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KX076639 - Homo sapiens isolate SG_Subject6 clone 866-6 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX077039 - Homo sapiens isolate SG_Subject8 clone 1266-8 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX075195 - Homo sapiens isolate PB_Subject6 clone 974-6 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX075138 - Homo sapiens isolate PB_Subject3 clone 917-3 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AB978254 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: Donor4-TRB218.
MG789036 - Homo sapiens isolate Sample1_Cell20_11B10_CDR3b T-cell receptor beta chain mRNA, partial sequence.
AB749921 - Homo sapiens mRNA for T-cell receptor beta chain, partial cds, clone: AD_36_beta.
M15222 - Homo sapiens T-cell receptor (TCRB) mRNA, partial cds.
MG192654 - Homo sapiens isolate B155_NN5_B12 T cell receptor beta mRNA, partial cds.
MG192853 - Homo sapiens isolate B207_NN8_D9 T cell receptor beta mRNA, partial cds.
MG193108 - Homo sapiens isolate HD20_NN17_C2 T cell receptor beta mRNA, partial cds.
MG789429 - Homo sapiens isolate Sample1_Cell193_13G2_CDR3b T-cell receptor beta chain mRNA, partial sequence.
MG789741 - Homo sapiens isolate Sample2_Cell2_1A2_CDR3b T-cell receptor beta chain mRNA, partial sequence.
MG790275 - Homo sapiens isolate Sample2_Cell244_5G9_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KM004788 - Homo sapiens clone 764 T cell receptor beta mRNA, partial cds.
AY751329 - Homo sapiens clone EBp18 T cell receptor beta chain mRNA, partial cds.
KX075402 - Homo sapiens isolate PB_Subject9 clone 1181-9 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076184 - Homo sapiens isolate SG_Subject4 clone 411-4 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076178 - Homo sapiens isolate SG_Subject4 clone 405-4 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076310 - Homo sapiens isolate SG_Subject5 clone 537-5 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076318 - Homo sapiens isolate SG_Subject5 clone 545-5 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AF088306 - Homo sapiens clone 16 T-cell receptor beta chain (TCRBV10S1P) mRNA, partial cds.
AF088307 - Homo sapiens clone 17 T-cell receptor beta chain (TCRBV10S1P) mRNA, partial cds.
DQ341461 - Homo sapiens clone J24N.43 T cell receptor beta chain mRNA, complete cds.
MG193068 - Homo sapiens isolate HD20_NN16_F11 T cell receptor beta mRNA, partial cds.
MG193080 - Homo sapiens isolate HD20_NN17_B2 T cell receptor beta mRNA, partial cds.
KX076727 - Homo sapiens isolate SG_Subject9 clone 954-9 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
S63249 - T-cell receptor beta chain {clone Pt2 beta14a} [human, rheumatoid synovial tissue, mRNA Partial, 240 nt].
MG192954 - Homo sapiens isolate HD19_NN14_D12 T cell receptor beta mRNA, partial cds.
MG790033 - Homo sapiens isolate Sample2_Cell136_2D9_CDR3b T-cell receptor beta chain mRNA, partial sequence.
MG790681 - Homo sapiens isolate Sample3_Cell179_2H8_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KM004569 - Homo sapiens clone 544 T cell receptor beta mRNA, partial cds.
KM004634 - Homo sapiens clone 609 T cell receptor beta mRNA, partial cds.
AF043783 - Homo sapiens patient CS-1 clone 37 T cell receptor beta chain CDR3 (TCRB) mRNA, partial cds.
AF043784 - Homo sapiens patient CS-1 clone 38 T cell receptor beta chain CDR3 (TCRB) mRNA, partial cds.
AB305879 - Homo sapiens mRNA for T cell receptor beta variable 28, partial cds, clone: SEB 199.
AB977713 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: E(1)-TRB153.
AB977649 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: EEM(1)-TRB93-1.
AB977594 - Homo sapiens mRNA for T cell receptor beta chain V-D-J-region, partial cds, isolate: CM(1)-TRB66.
MG790834 - Homo sapiens isolate Sample3_Cell244_6B11_CDR3b T-cell receptor beta chain mRNA, partial sequence.
KM004197 - Homo sapiens clone 172 T cell receptor beta mRNA, partial cds.
KM004698 - Homo sapiens clone 673 T cell receptor beta mRNA, partial cds.
KX075760 - Homo sapiens isolate PB_Subject8 clone 1539-8 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
KX076556 - Homo sapiens isolate SG_Subject3 clone 783-3 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
JF731199 - Homo sapiens clone T56_TV_BV3.13_2 T cell receptor beta chain (TCRB) mRNA, partial cds.
AF078995 - Homo sapiens T-cell receptor beta chain (TCRB) mRNA, partial cds.
S81469 - T cell antigen receptor beta-chain {rearranged V 6.1-DJ junctional region} [human, adult thymus, mRNA, 54 nt].
KX074323 - Homo sapiens isolate PB_Subject1 clone 102-1 T-cell receptor beta chain variable region (TRB) mRNA, partial cds.
AF327908 - Homo sapiens T cell receptor beta chain mRNA, partial cds.
MG192888 - Homo sapiens isolate B207_NN8_B11 T cell receptor beta mRNA, partial cds.
MG192889 - Homo sapiens isolate B207_NN9_E11 T cell receptor beta mRNA, partial cds.
GQ502887 - Homo sapiens isolate 12 clone 2 T cell receptor beta chain mRNA, partial cds.
GQ502898 - Homo sapiens isolate 12 clone 48 T cell receptor beta chain mRNA, partial cds.
EF592015 - Homo sapiens subject 12 clone 37 T-cell receptor beta chain mRNA, partial cds.
KM004777 - Homo sapiens clone 752 T cell receptor beta mRNA, partial cds.
AB044103 - Homo sapiens mRNA for T-cell receptor beta chain, partial cds, clone:TCRVB.5.
D50754 - Homo sapiens mRNA for T-cell receptor beta chain V6-D-J1.3-C1 region, partial cds.
KM004091 - Homo sapiens clone 66 T cell receptor beta mRNA, partial cds.
MF179665 - Homo sapiens isolate S19-2 T-cell receptor beta mRNA, complete cds.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A0J9YWP8, uc284qbl.1
UCSC ID: ENST00000633780.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.