Mouse Gene Fgf17 (ENSMUST00000022697.6) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Mus musculus fibroblast growth factor 17 (Fgf17), transcript variant 1, mRNA. (from RefSeq NM_008004)
Gencode Transcript: ENSMUST00000022697.6
Gencode Gene: ENSMUSG00000022101.6
Transcript (Including UTRs)
Position: mm10 chr14:70,636,203-70,642,268 Size: 6,066 Total Exon Count: 5 Strand: -
Position: mm10 chr14:70,636,730-70,641,757 Size: 5,028 Coding Exon Count: 5
Data last updated at UCSC: 2019-09-19
Sequence and Links to Tools and Databases
Comparative Toxicogenomics Database (CTD)
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR008996 - Cytokine_IL1-like
IPR002348 - IL1_HBGF
Pfam Domains: PF00167 - Fibroblast growth factor
SCOP Domains: 50353 - Cytokine
50405 - Actin-crosslinking proteins
ModBase Predicted Comparative 3D Structure on Q0VF19
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Molecular Function: GO:0005104 fibroblast growth factor receptor binding
GO:0005105 type 1 fibroblast growth factor receptor binding
GO:0005111 type 2 fibroblast growth factor receptor binding
GO:0008083 growth factor activity
Biological Process: GO:0008284 positive regulation of cell proliferation
GO:0008543 fibroblast growth factor receptor signaling pathway
GO:0010469 regulation of receptor activity
Cellular Component: GO:0005576 extracellular region
Descriptions from all associated GenBank mRNAs
LF200068 - JP 2014500723-A/7571: Polycomb-Associated Non-Coding RNAs. AK082858 - Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330044C05 product:fibroblast growth factor 17, full insert sequence. AK077555 - Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730446E06 product:fibroblast growth factor 17, full insert sequence. LF241964 - JP 2014500723-A/49467: Polycomb-Associated Non-Coding RNAs. LF241965 - JP 2014500723-A/49468: Polycomb-Associated Non-Coding RNAs. BC119033 - Mus musculus fibroblast growth factor 17, mRNA (cDNA clone MGC:155349 IMAGE:8733782), complete cds. BC144776 - Mus musculus fibroblast growth factor 17, mRNA (cDNA clone MGC:178332 IMAGE:9053324), complete cds. AB009250 - Mus musculus mRNA for FGF-17, complete cds. LF241966 - JP 2014500723-A/49469: Polycomb-Associated Non-Coding RNAs. LF241969 - JP 2014500723-A/49472: Polycomb-Associated Non-Coding RNAs. LF241970 - JP 2014500723-A/49473: Polycomb-Associated Non-Coding RNAs. MA435645 - JP 2018138019-A/7571: Polycomb-Associated Non-Coding RNAs. MA477541 - JP 2018138019-A/49467: Polycomb-Associated Non-Coding RNAs. MA477542 - JP 2018138019-A/49468: Polycomb-Associated Non-Coding RNAs. MA477543 - JP 2018138019-A/49469: Polycomb-Associated Non-Coding RNAs. MA477546 - JP 2018138019-A/49472: Polycomb-Associated Non-Coding RNAs. MA477547 - JP 2018138019-A/49473: Polycomb-Associated Non-Coding RNAs.
Biochemical and Signaling Pathways
KEGG - Kyoto Encyclopedia of Genes and Genomes mmu04010 - MAPK signaling pathway mmu04810 - Regulation of actin cytoskeleton mmu05200 - Pathways in cancer mmu05218 - Melanoma
Other Names for This Gene
Alternate Gene Symbols: mCG_16192, NM_008004, Q0VF19, Q0VF19_MOUSE, uc007uos.1, uc007uos.2 UCSC ID: uc007uos.2 RefSeq Accession: NM_008004
Q0VF19 CCDS: CCDS27260.1
Gene Model Information
for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
for details on how this gene model was made and data restrictions if any.