Human Gene CAMKV (ENST00000477224.6) from GENCODE V44
Description: Homo sapiens CaM kinase like vesicle associated (CAMKV), transcript variant 1, mRNA. (from RefSeq NM_024046)
Gencode Transcript: ENST00000477224.6
Gencode Gene: ENSG00000164076.17
Transcript (Including UTRs)
Position: hg38 chr3:49,857,989-49,869,906 Size: 11,918 Total Exon Count: 11 Strand: -
Coding Region
Position: hg38 chr3:49,859,318-49,862,388 Size: 3,071 Coding Exon Count: 10
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: CAMKV_HUMAN
DESCRIPTION: RecName: Full=CaM kinase-like vesicle-associated protein;
FUNCTION: Does not appear to have detectable kinase activity.COFACTOR: Calcium (By similarity).SUBUNIT: Interacts with calmodulin, in the presence of calcium (By similarity).SUBCELLULAR LOCATION: Cell membrane; Peripheral membrane protein (By similarity). Cytoplasmic vesicle membrane; Peripheral membrane protein (By similarity). Note=Predominantly observed in association with the plasma membrane of soma and in neurites, both axons and dendrites. May be associated with vesicular structures (By similarity).DOMAIN: The protein kinase domain is predicted to be catalytically inactive.SIMILARITY: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family.SIMILARITY: Contains 1 protein kinase domain.
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
The following chemicals interact with this gene
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR020636 - Ca/CaM-dep_Ca-dep_prot_Kinase
IPR011009 - Kinase-like_dom
IPR000719 - Prot_kinase_cat_dom
IPR002290 - Ser/Thr_dual-sp_kinase_dom
Pfam Domains: PF00069 - Protein kinase domain
ModBase Predicted Comparative 3D Structure on Q8NCB2
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Descriptions from all associated GenBank mRNAs
LF208621 - JP 2014500723-A/16124: Polycomb-Associated Non-Coding RNAs.MA444198 - JP 2018138019-A/16124: Polycomb-Associated Non-Coding RNAs.AL833943 - Homo sapiens mRNA; cDNA DKFZp564G2082 (from clone DKFZp564G2082).BX647074 - Homo sapiens mRNA; cDNA DKFZp686D0882 (from clone DKFZp686D0882).BC019256 - Homo sapiens CaM kinase-like vesicle-associated, mRNA (cDNA clone MGC:1821 IMAGE:3502894), complete cds.BC000497 - Homo sapiens CaM kinase-like vesicle-associated, mRNA (cDNA clone MGC:8407 IMAGE:2820734), complete cds.BC001921 - Homo sapiens CaM kinase-like vesicle-associated, mRNA (cDNA clone MGC:3732 IMAGE:2820734), complete cds.BC005828 - Homo sapiens CaM kinase-like vesicle-associated, mRNA (cDNA clone MGC:1820 IMAGE:2820734), complete cds.BC017363 - Homo sapiens CaM kinase-like vesicle-associated, mRNA (cDNA clone MGC:10408 IMAGE:3940018), complete cds.AL136697 - Homo sapiens mRNA; cDNA DKFZp564E0482 (from clone DKFZp564E0482).AK074899 - Homo sapiens cDNA FLJ90418 fis, clone NT2RP3000172, weakly similar to CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE I (EC 2.7.1.123).AK075294 - Homo sapiens cDNA FLJ90813 fis, clone Y79AA1000967, weakly similar to CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE I (EC 2.7.1.123).BC033374 - Homo sapiens CaM kinase-like vesicle-associated, mRNA (cDNA clone IMAGE:4934142).AL834461 - Homo sapiens mRNA; cDNA DKFZp566K241 (from clone DKFZp566K241).JD025981 - Sequence 7005 from Patent EP1572962.AK074856 - Homo sapiens cDNA FLJ90375 fis, clone NT2RP2004670, highly similar to Rattus norvegicus vesicla-associate calmodulin-binding protein mRNA.JD423808 - Sequence 404832 from Patent EP1572962.JD030761 - Sequence 11785 from Patent EP1572962.JD227197 - Sequence 208221 from Patent EP1572962.JD545926 - Sequence 526950 from Patent EP1572962.JD279212 - Sequence 260236 from Patent EP1572962.JD084513 - Sequence 65537 from Patent EP1572962.JD305129 - Sequence 286153 from Patent EP1572962.JD039454 - Sequence 20478 from Patent EP1572962.JD290828 - Sequence 271852 from Patent EP1572962.JD166350 - Sequence 147374 from Patent EP1572962.JD130220 - Sequence 111244 from Patent EP1572962.JD218226 - Sequence 199250 from Patent EP1572962.JD303569 - Sequence 284593 from Patent EP1572962.JD071316 - Sequence 52340 from Patent EP1572962.JD321677 - Sequence 302701 from Patent EP1572962.JD340590 - Sequence 321614 from Patent EP1572962.JD282642 - Sequence 263666 from Patent EP1572962.LF378468 - JP 2014500723-A/185971: Polycomb-Associated Non-Coding RNAs.MA614045 - JP 2018138019-A/185971: Polycomb-Associated Non-Coding RNAs.JD079351 - Sequence 60375 from Patent EP1572962.JD186506 - Sequence 167530 from Patent EP1572962.JD200676 - Sequence 181700 from Patent EP1572962.JD192636 - Sequence 173660 from Patent EP1572962.JD365207 - Sequence 346231 from Patent EP1572962.JD519273 - Sequence 500297 from Patent EP1572962.JD253500 - Sequence 234524 from Patent EP1572962.JD556765 - Sequence 537789 from Patent EP1572962.JD429945 - Sequence 410969 from Patent EP1572962.JD402868 - Sequence 383892 from Patent EP1572962.JD394159 - Sequence 375183 from Patent EP1572962.JD242107 - Sequence 223131 from Patent EP1572962.JD272621 - Sequence 253645 from Patent EP1572962.JD235771 - Sequence 216795 from Patent EP1572962.JD335937 - Sequence 316961 from Patent EP1572962.JD453006 - Sequence 434030 from Patent EP1572962.JD347330 - Sequence 328354 from Patent EP1572962.JD266904 - Sequence 247928 from Patent EP1572962.AK226073 - Homo sapiens mRNA for CaM kinase-like vesicle-associated variant, clone: fk15481.CR533508 - Homo sapiens full open reading frame cDNA clone RZPDo834D0819D for gene MGC8407, hypothetical protein MGC8407; complete cds, incl. stopcodon.AK297437 - Homo sapiens cDNA FLJ54087 complete cds, highly similar to Homo sapiens CaM kinase-like vesicle-associated (CAMKV), mRNA.AK297258 - Homo sapiens cDNA FLJ54113 complete cds, highly similar to Homo sapiens CaM kinase-like vesicle-associated (CAMKV), mRNA.AK295588 - Homo sapiens cDNA FLJ59535 complete cds, highly similar to Homo sapiens CaM kinase-like vesicle-associated (CAMKV), mRNA.JD179445 - Sequence 160469 from Patent EP1572962.JD178424 - Sequence 159448 from Patent EP1572962.JD361065 - Sequence 342089 from Patent EP1572962.HM005675 - Homo sapiens clone HTL-T-52e testis tissue sperm-binding protein Li 52e mRNA, complete cds.AK315525 - Homo sapiens cDNA, FLJ96591.KJ899511 - Synthetic construct Homo sapiens clone ccsbBroadEn_08905 CAMKV gene, encodes complete protein.KJ905532 - Synthetic construct Homo sapiens clone ccsbBroadEn_15144 CAMKV gene, encodes complete protein.KJ906306 - Synthetic construct Homo sapiens clone ccsbBroadEn_15976 CAMKV gene, encodes complete protein.DQ891404 - Synthetic construct clone IMAGE:100004034; FLH176617.01X; RZPDo839F05122D CaM kinase-like vesicle-associated (CAMKV) gene, encodes complete protein.DQ896819 - Synthetic construct Homo sapiens clone IMAGE:100011279; FLH176613.01L; RZPDo839F05121D CaM kinase-like vesicle-associated (CAMKV) gene, encodes complete protein.LF378467 - JP 2014500723-A/185970: Polycomb-Associated Non-Coding RNAs.MA614044 - JP 2018138019-A/185970: Polycomb-Associated Non-Coding RNAs.LF378466 - JP 2014500723-A/185969: Polycomb-Associated Non-Coding RNAs.MA614043 - JP 2018138019-A/185969: Polycomb-Associated Non-Coding RNAs.AK299953 - Homo sapiens cDNA FLJ53649 complete cds, highly similar to Mus musculus CaM kinase-like vesicle-associated (Camkv), mRNA.LF378465 - JP 2014500723-A/185968: Polycomb-Associated Non-Coding RNAs.MA614042 - JP 2018138019-A/185968: Polycomb-Associated Non-Coding RNAs.LF378464 - JP 2014500723-A/185967: Polycomb-Associated Non-Coding RNAs.MA614041 - JP 2018138019-A/185967: Polycomb-Associated Non-Coding RNAs.
Other Names for This Gene
Alternate Gene Symbols: A6NFD4, CAMKV_HUMAN, ENST00000477224.1, ENST00000477224.2, ENST00000477224.3, ENST00000477224.4, ENST00000477224.5, NM_024046, Q6FIB8, Q8NBS8, Q8NC85, Q8NCB2, Q8NDU4, Q8WTT8, Q9BQC9, Q9H0Q5, uc003cxt.1, uc003cxt.2, uc003cxt.3UCSC ID: ENST00000477224.6RefSeq Accession: NM_024046
Protein: Q8NCB2
(aka CAMKV_HUMAN)
CCDS: CCDS33762.1
Methods, Credits, and Use Restrictions
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