Human Gene LINC02904 (ENST00000524181.5) from GENCODE V44
  Description: Homo sapiens chromosome 8 open reading frame 31 (C8orf31), transcript variant 2, long non-coding RNA. (from RefSeq NR_126398)
Gencode Transcript: ENST00000524181.5
Gencode Gene: ENSG00000177335.13
Transcript (Including UTRs)
   Position: hg38 chr8:143,039,261-143,053,444 Size: 14,184 Total Exon Count: 8 Strand: +


Page IndexSequence and LinksPrimersRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr8:143,039,261-143,053,444)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
Entrez GeneExonPrimerGencodeLynxPubMedBioGrid CRISPR DB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 2.42 RPKM in Thyroid
Total median expression: 30.93 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC073830 - Homo sapiens chromosome 8 open reading frame 31, mRNA (cDNA clone IMAGE:3454245), complete cds.
AK094450 - Homo sapiens cDNA FLJ37131 fis, clone BRACE2023070.
BC120993 - Homo sapiens cDNA clone IMAGE:40116415.
BC063497 - Homo sapiens chromosome 8 open reading frame 31, mRNA (cDNA clone IMAGE:5309478).
JD215345 - Sequence 196369 from Patent EP1572962.
JD131388 - Sequence 112412 from Patent EP1572962.
JD049365 - Sequence 30389 from Patent EP1572962.
JD372177 - Sequence 353201 from Patent EP1572962.
JD216581 - Sequence 197605 from Patent EP1572962.
JD057449 - Sequence 38473 from Patent EP1572962.
JD133694 - Sequence 114718 from Patent EP1572962.
JD400995 - Sequence 382019 from Patent EP1572962.
JD253639 - Sequence 234663 from Patent EP1572962.
KJ904168 - Synthetic construct Homo sapiens clone ccsbBroadEn_13562 C8orf31 gene, encodes complete protein.
JD203282 - Sequence 184306 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000524181.1, ENST00000524181.2, ENST00000524181.3, ENST00000524181.4, NR_126398, uc003yxq.1, uc003yxq.2
UCSC ID: ENST00000524181.5
RefSeq Accession: NR_126398

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.