Mouse Gene Tas2r130 (ENSMUST00000067597.5) from GENCODE VM33
  Description: Mus musculus taste receptor, type 2, member 130 (Tas2r130), mRNA. (from RefSeq NM_199156)
Gencode Transcript: ENSMUST00000067597.5
Gencode Gene: ENSMUSG00000054497.6
Transcript (Including UTRs)
   Position: mm39 chr6:131,606,786-131,607,875 Size: 1,090 Total Exon Count: 1 Strand: -
Coding Region
   Position: mm39 chr6:131,606,855-131,607,793 Size: 939 Coding Exon Count: 1 

Page IndexSequence and LinksUniProtKB CommentsPrimersRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther NamesMethods
Data last updated at UCSC: 2023-08-15 19:06:27

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr6:131,606,786-131,607,875)mRNA (may differ from genome)Protein (312 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGeneCardsMGI
PubMedReactomeSOURCEUniProtKB

-  Comments and Description Text from UniProtKB
  ID: TA2R7_MOUSE
DESCRIPTION: RecName: Full=Taste receptor type 2 member 7; Short=T2R7; AltName: Full=STC7-4; AltName: Full=T2R30; AltName: Full=T2R6; AltName: Full=mT2R42;
FUNCTION: Gustducin-coupled receptor implicated in the perception of bitter compounds in the oral cavity and the gastrointestinal tract. Signals through PLCB2 and the calcium-regulated cation channel TRPM5.
SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein.
TISSUE SPECIFICITY: Expressed in subsets of taste receptor cells of the tongue and palate epithelium and exclusively in gustducin- positive cells. Expressed in 15% taste bud cells in circumvallate and foliate papillae but only in 2% in fungiform papillae. Expressed in gastric and duodenal tissues.
MISCELLANEOUS: Several bitter taste receptors are expressed in a single taste receptor cell.
SIMILARITY: Belongs to the G-protein coupled receptor T2R family.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -6.0082-0.073 Picture PostScript Text
3' UTR -6.9069-0.100 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR017452 - GPCR_Rhodpsn_supfam
IPR007960 - TAS2_rcpt

Pfam Domains:
PF05296 - Taste receptor protein (TAS2R)

ModBase Predicted Comparative 3D Structure on P59530
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologGenome BrowserNo orthologNo orthologNo orthologNo ortholog
      
      
 RGD    
 Protein Sequence    
 Alignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004871 signal transducer activity
GO:0004930 G-protein coupled receptor activity
GO:0033038 bitter taste receptor activity

Biological Process:
GO:0001580 detection of chemical stimulus involved in sensory perception of bitter taste
GO:0007165 signal transduction
GO:0007186 G-protein coupled receptor signaling pathway
GO:0050896 response to stimulus
GO:0050909 sensory perception of taste

Cellular Component:
GO:0016020 membrane
GO:0016021 integral component of membrane


-  Descriptions from all associated GenBank mRNAs
  BC119329 - Mus musculus taste receptor, type 2, member 130, mRNA (cDNA clone MGC:155645 IMAGE:8734078), complete cds.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein P59530 (Reactome details) participates in the following event(s):

R-MMU-3296233 T2Rs bind bitter-tasting compounds
R-MMU-749454 The Ligand:GPCR:Gi complex dissociates
R-MMU-749456 Liganded Gi-activating GPCRs bind inactive heterotrimeric G-protein Gi
R-MMU-380073 Liganded Gi-activating GPCR acts as a GEF for Gi
R-MMU-420499 Class C/3 (Metabotropic glutamate/pheromone receptors)
R-MMU-418594 G alpha (i) signalling events
R-MMU-500792 GPCR ligand binding
R-MMU-388396 GPCR downstream signalling
R-MMU-372790 Signaling by GPCR
R-MMU-162582 Signal Transduction

-  Other Names for This Gene
  Alternate Gene Symbols: ENSMUST00000067597.1, ENSMUST00000067597.2, ENSMUST00000067597.3, ENSMUST00000067597.4, NM_199156, P59530, Q0VE81, Q7M726, TA2R7_MOUSE, Tas2r6, Tas2r7, uc009eiv.1, uc009eiv.2, uc009eiv.3
UCSC ID: ENSMUST00000067597.5
RefSeq Accession: NM_199156
Protein: P59530 (aka TA2R7_MOUSE)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.