Gene interactions and pathways from curated databases and text-mining
CDK9: top 25 interacting genes (chr9:130548304-130553052)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only CDK9-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-CDK9 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with CDK9, not among the Top 25
Other genes interacting with CDK9. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

ACACA ACTL6A AHCYL1 AHCYL2 AIFM1 AIP ANKRD30A
ANXA2 ARID3B ATAD3A ATP1A1 ATP2A2 ATP5A1 ATR
ATRIP BAG2 BARD1 BCL10 BCL2 BMP10 BRCA1
BRD4 BRDT C1QBP CAD CAMK1 CASK CASP1
CASP10 CASP12 CASP14 CASP16 CASP2 CASP3 CASP4
CASP5 CASP6 CASP7 CASP8 CASP9 CCAR2 CCDC87
CCNC CCND1 CCNH CCNT2 CCT2 CCT3 CCT4
CCT5 CCT6A CCT7 CCT8 CDC37 CDC45 CDC6
CDK12 CDK15 CDK4 CDK5R1 CDK7 CDK8 CDKN2B
CIB2 CKAP5 CLSPN CNTN2 CPSF2 CSNK2B CTD
CTDP1 CTDSPL CTR9 CTSD CUL1 DCAF16 DCD
DDX5 DHX30 DNAJA1 DNAJA2 DTYMK EAF1 EAF2
EEF1A2 ELL ELL2 ELL3 ELP2 ELP3 ELP4
EP300 EPHB2 ERCC6 EWSR1 EXOSC5 EZH2 FAM98A
FBL FBN2 FBXO25 FBXO3 FGFR1 FGFR2 FGFR4
FUS GATA4 GFAP GRN GSS HDAC1 HDAC2
HDAC3 HEXIM2 HIST1H4A HLTF HNF4A HNRNPA0 HNRNPA1
HNRNPA2B1 HNRNPD HNRNPH1 HNRNPH3 HNRNPK HNRNPR HNRNPU
HRNR HSP90AA1 HSP90AB1 HSPA1A HSPA2 HSPA5 HSPA6
HSPA8 HSPA9 HSPD1 HTATSF1 IFIT1 IFIT2 IGF2BP1
IGF2BP2 IKBKAP IL6 ILF2 IMMT INPP5K IRS4
KIAA0947 KPNA2 LANCL2 LARP7 LEO1 LGALS3BP MAML1
MAPK8 MARS MATR3 MCCC1 MCCC2 MCS MDFIC
MDM2 MED13 MED15 MED21 MED26 MED28 MEPCE
MLLT1 MLLT3 MNAT1 MRPS27 MSH2 MYBBP1A MYBL2
MYC MYLIP NAP1L4 NBN NCBP1 NCBP2 NCL
NEFH NELFA NELFB NELFCD NELFE NFKB1 NOP58
NOTCH1 NPM3 NPY4R NR2E3 NUFIP1 OXSR1 P4HA1
PAF1 PAXIP1 PC PCBP2 PCCA PCCB PEX2
PGC PIN1 PLEC PMS1 POLR2A POLR2B POLR2C
POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J
POLR2K POLR2L PPARGC1A PPM1A PPM1G PPP1CC PRKDC
PRSS3 PSMD3 RAD21 RB1 RBBP4 RBBP7 RBM39
RBPJ RCHY1 RCN2 RDBP RELA RFC4 RMND5B
RPAP1 RPL22 RPL23 RPL23A RPL24 RPL35 RPL36A
RPL37A RPL4 RPLP2 RPN1 RPS11 RPS13 RPS14
RPS18 RPS2 RPS23 RPS24 RPS25 RPS26 RPS27
RPS27L RPS3 RPS3A RPS4X RQCD1 RTF1 RUVBL1
RUVBL2 S100A8 SART3 SEC31A SERPINH1 SETD1B SHROOM3
SIN3A SIRT1 SKIV2L SKP1 SKP2 SLC25A3 SLC25A5
SLC9A3R1 SMAD1 SMAD3 SMC2 SMC4 SNW1 SP1
SQSTM1 SRCAP SRRM2 SSRP1 STAT3 STIP1 STK36
STK4 SUPT16H SUPT5H SUPT6H SYNCRIP TAF1 TAF4
TAF6 TAF7 TAL1 TBL3 TBP TCEA1 TCEA2
TCEB1 TCEB2 TCEB3 TCF12 TCF15 TCF19 TCF20
TCF21 TCF23 TCF24 TCF25 TCF3 TCF4 TCF7
TCHP TCP1 TERF1 TERF2 TFG TGFB1 TNF
TRAF2 TRAP1 TRIM28 TRIP12 TTF2 TUBA1C TUBB
TUBB4B TUFM U2AF2 UBC UBE2A UBE2O UBE2S
UBL4A UBR5 ULK1 USP11 VIM WDR61 YBX1
ZC3H13 ZFP91 ZMYM6 ZNF579
Data information
Please see the Gene Interactions Track Manual.