Schema for WashU Clones - Washington University Clones
  Database: sacCer3    Primary Table: sgdClone    Row Count: 1,201   Data last updated: 2011-08-31
Format description: Clone info from yeast genome database
fieldexampleSQL type info description
bin 585smallint(5) unsigned range Indexing field to speed chromosome range queries.
chrom chrIvarchar(255) values Reference sequence chromosome or scaffold
chromStart 2662int(10) unsigned range Start position in chromosome
chromEnd 14901int(10) unsigned range End position in chromosome
name 3029varchar(255) values Washington University Name
atccName 70860varchar(255) values ATCC clone name (optional)

Sample Rows
 
binchromchromStartchromEndnameatccName
585chrI266214901302970860
585chrI367823025710570837
585chrI1048622088155670858
585chrI1759332731501070331
585chrI2923746374746770872
585chrI4637479360993271050
585chrI4637460294649170719
585chrI5556066807593770637
585chrI6356683105508070512
585chrI7936096939413770449

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

WashU Clones (sgdClone) Track Description
 

Description

This track displays the location of clones (mostly lambda and cosmid clones) from Washington University in St. Louis using the names assigned by that group. This information was downloaded from the Saccharomyces Genome Database (SGD) from the file
https://downloads.yeastgenome.org/curation/chromosomal_feature/clone.tab.

Credits

Thanks to Washington University in St. Louis and the SGD for the data used in this track.