Human hg19 chr2:86,332,633-86,932,932 UCSC Genome Browser v457

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UCSC Genome Browser on Human (GRCh37/hg19)
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chr2:86,332,633-86,932,932 600,300 bp.

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Click on a feature for details. Shift+click+drag to zoom in. Click grey side bars for track options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position. Press "?" for keyboard shortcuts. Use drop-down controls below and press refresh to alter tracks displayed.

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Custom Tracks

22RV1_INPUT_comb Total Tags = 8.00e+07, normalized to 1.00e+07

22rv1_RNAseq_rep1.hg19 Total Tags = 1.48e+07, normalized to 1.00e+07

22rv1_RNAseq_rep2.hg19 Total Tags = 1.71e+07, normalized to 1.00e+07

22rv1_RNAseq_rep3.hg19 Total Tags = 1.96e+07, normalized to 1.00e+07

C42B_CTCF_ENCSR460LGH Total Tags = 8.00e+07, normalized to 1.00e+07

C42B_FOXA1_Vehicle_GSM984391 Total Tags = 2.00e+07, normalized to 1.00e+07

C42B_GSM984391_FOXA1_Vehicle

C42B_H3K27Ac_ENCSR279KIX Total Tags = 8.00e+07, normalized to 1.00e+07

C42B_H3K27me3_USC1345 Total Tags = 4.00e+07, normalized to 1.00e+07

C42B_H3K27me3_USC1353 Total Tags = 4.00e+07, normalized to 1.00e+07

C42B_H3K36me3_USC1356 Total Tags = 4.00e+07, normalized to 1.00e+07

C42B_H3K36me3_USC1357 Total Tags = 4.00e+07, normalized to 1.00e+07

C42B_H3K4me3_USC1330 Total Tags = 8.00e+07, normalized to 1.00e+07

C42B_H3K9me3_USC1343 Total Tags = 4.00e+07, normalized to 1.00e+07

C42B_H3K9me3_USC1349 Total Tags = 4.00e+07, normalized to 1.00e+07

C42B_H3K9me3_USC1434 Total Tags = 4.00e+07, normalized to 1.00e+07

C42B_INPUT_comb Total Tags = 8.00e+07, normalized to 1.00e+07

C42B_PolII_USC1310 Total Tags = 8.00e+07, normalized to 1.00e+07

C42B_PolII_USC1329 Total Tags = 8.00e+07, normalized to 1.00e+07

C42B_PolIIe_USC1328 Total Tags = 8.00e+07, normalized to 1.00e+07

C42B_RNAseq_rep1.hg19 Total Tags = 2.73e+07, normalized to 1.00e+07

C42B_RNAseq_rep2.hg19 Total Tags = 2.18e+07, normalized to 1.00e+07

C42B_RNAseq_rep3.hg19 Total Tags = 2.32e+07, normalized to 1.00e+07

Enhancer_for_CRISPR

FOXA1 peak intersectTo Enhancer C42B

GM12878 TAD TopDom

gRNA_Hi-C_Jiani0912

gRNA_PCaHiC_Jenevieve

GSE98730_LNCaP_WA

GSE98730_PrEC_WA

HEK293T_ZNF711_USC1291 Total Tags = 8.00e+07, normalized to 1.00e+07

MCF7_ZNF711_USC1287 Total Tags = 8.00e+07, normalized to 1.00e+07

PCa22rv1_CTCF_ENCSR857PBV Total Tags = 8.00e+07, normalized to 1.00e+07

PCa22Rv1_H3K27Ac_ENCSR391NPE Total Tags = 8.00e+07, normalized to 1.00e+07

PCa22rv1_H3K27me3_USC1346 Total Tags = 4.00e+07, normalized to 1.00e+07

PCa22rv1_H3K9me3_USC1344 Total Tags = 4.00e+07, normalized to 1.00e+07

Primers_20171128

Primers_20171218

Primers_Andrew_used

RWPE1_CTCF_ENCSR303GFI Total Tags = 8.00e+07, normalized to 1.00e+07

RWPE1_DNase_GSM1541008 Total Tags = 8.00e+07, normalized to 1.00e+07

RWPE1_H3K27Ac_ENCSR203KEU Total Tags = 8.00e+07, normalized to 1.00e+07

RWPE1_H3K27ac_GSM1541009 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K27ac_GSM1541010 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K27me3_GSM1541011 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K27me3_GSM1541012 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K27me3_USC1355 Total Tags = 4.00e+07, normalized to 1.00e+07

RWPE1_H3K36me3_GSM1541013 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K36me3_GSM1541014 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K4me1_GSM1541015 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K4me1_GSM1541016 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K4me3_GSM1541017 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_H3K4me3_GSM1541018 Total Tags = 1.00e+07, normalized to 1.00e+07

RWPE1_INPUT_comb Total Tags = 8.00e+07, normalized to 1.00e+07

RWPE1_Input_GSM1541107 Total Tags = 8.00e+07, normalized to 1.00e+07

RWPE1_RNAseq_rep1.hg19 Total Tags = 2.39e+07, normalized to 1.00e+07

RWPE1_RNAseq_rep2.hg19 Total Tags = 2.61e+07, normalized to 1.00e+07

RWPE1_RNAseq_rep3.hg19 Total Tags = 2.45e+07, normalized to 1.00e+07

tb_ct_CTCFmotifsredforwardbluereverse_7645

USC1040_ZFX_HCT116_RepA

USC1046_INPUT_HCT116_RepA

USC1048_ZFX_HEK293T_RepA_CGATGT

USC1049_ZFX_C42B_RepB_TGACCA

USC1050_ZFX_MCF7_RepB_GCCAAT

USC1051_INPUT_HEK293T_RepA_CGATGT

USC1056_ZFX_HEK293T_RepB

USC1063_INPUT_HEK293T_RepB_GATCAG

USC1343USC1349_H3K9me3_C42B Total Tags = 4.00e+07, normalized to 1.00e+07

USC1344USC1350_H3K9me3_PCa22rv1 Total Tags = 4.00e+07, normalized to 1.00e+07

USC1345USC1353_H3K27me3_C42B Total Tags = 4.00e+07, normalized to 1.00e+07

USC1346USC1358_H3K27me3_PCa22rv1 Total Tags = 4.00e+07, normalized to 1.00e+07

USC1351USC1352_H3K9me3_RWPE1 Total Tags = 4.00e+07, normalized to 1.00e+07

USC1354USC1355_H3K27me3_RWPE1 Total Tags = 4.00e+07, normalized to 1.00e+07

USC1356USC1357_H3K36me3_C42B Total Tags = 4.00e+07, normalized to 1.00e+07

USC1359USC1360_H3K36me3_PCa22rv1 Total Tags = 4.00e+07, normalized to 1.00e+07

USC1361USC1362_H3K36me3_RWPE1 Total Tags = 4.00e+07, normalized to 1.00e+07

USC1392_H3K9me3_PrEC Total Tags = 4.00e+07, normalized to 1.00e+07

USC1393_H3K27me3_PrEC Total Tags = 4.00e+07, normalized to 1.00e+07

USC1394_H3K36me3_PrEC Total Tags = 4.00e+07, normalized to 1.00e+07

USC987_INPUT_HCT116_RepB

USC990_ZFX_HCT116_RepB

Hub (Repli-seq ENCSR000CXJ)

Repli-seq of GM12878 ENCSR000CXJ

Hub (search: Repli-seq)

Hub (Histone ChIP-seq ENCSR431UUY)

H3K27me3 histone of IMR-90 ENCSR431UUY

Hub (Histone ChIP-seq ENCSR279KIX)

H3K27ac histone of C4-2B ENCSR279KIX

Hub (Repli-seq ENCSR703BOK)

Repli-seq of GM12878 ENCSR703BOK

Hub (Repli-seq ENCSR257NBQ)

Repli-seq of GM12878 ENCSR257NBQ

Hub (Repli-seq ENCSR214GWY)

Repli-seq of GM12878 ENCSR214GWY

Hub (Histone ChIP-seq ENCSR437ORF)

H3K36me3 histone of IMR-90 ENCSR437ORF

Hub (Repli-seq ENCSR849LEC)

Repli-seq of GM12878 ENCSR849LEC

Hub (Repli-seq ENCSR025TZP)

Repli-seq of GM12878 ENCSR025TZP

Hub (TF ChIP-seq ENCSR460LGH)

CTCF TF ChIP-seq of C4-2B ENCSR460LGH

Hub (Histone ChIP-seq ENCSR000DRX)

H3K27me3 histone of GM12878 ENCSR000DRX

Track Collections

New Collection (1)

Hub (Histone ChIP-seq ENCSR000DRW)

H3K36me3 histone of GM12878 ENCSR000DRW

Mapping and Sequencing

p14 Fix Patches

p14 Alt Haplotypes

Chromosome Band

Exome Probesets

Fosmid End Pairs

GRC Map Contigs

liftOver & ReMap

Problematic Regions

Genes and Gene Predictions

updated GENCODE Versions

IKMC Genes Mapped

LRG Transcripts

Pfam in UCSC Gene

Prediction Archive

Retroposed Genes

UCSC Alt Events

Phenotype and Literature

ClinVar Variants

Constraint scores

Development Delay

Gene Interactions

Haploinsufficiency

new Polygenic Risk Scores

UniProt Variants

Variants in Papers

mRNA and EST

H-Inv

Human RNA Editing

SIB Alt-Splicing

Expression

CSHL Small RNA-seq

EPDnew Promoters

GTEx Transcript

GWIPS-viz Riboseq

Regulation

ENCODE Regulation

ENC DNase/FAIRE

ENC RNA Binding

Genome Segments

GTEx Combined eQTL

GTEx Tissue eQTL

JASPAR Transcription Factors

Stanf Nucleosome

SUNY SwitchGear

TS miRNA Targets

UCSF Brain Methyl

UMMS Brain Hist

new VISTA Enhancers

Comparative Genomics

Cons Indels MmCf

Primate Chain/Net

Placental Chain/Net

Vertebrate Chain/Net

CHM13 alignments

Neandertal Assembly and Analysis

Denisova Assembly and Analysis

Variation

Rare Harmful Vars

Array Probesets

dbVar Common Struct Var

Genome In a Bottle

Genome Variants

HGDP Allele Freq

Platinum Genomes

Repeats

Interrupted Rpts